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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|158517933, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVPATLYA CLLGLCALVP RLAGLNICTS GSATSCEECL LIHPKCAWCS KEYFGNPRSI  60
   61 ISRCDLKANL IRNGCGGEIE SPASSTHVLR NLPLSSKGSS AMGSDVIQMT PQEIAVSLRP 120
  121 GDQATFQLQV RQVEDYPVDL YYLMDLSLSM KDDLDNIRSL GTKLAEEMRK LTSNFRLGFG 180
  181 SFVDKDISPF SYTAPRYQTN PCIGYKLFPN CVPSFGFRHL LPLTDRVDSF NEEVRKQRVS 240
  241 RNRDAPEGGF DAVLQAAVCK EKIGWRKDAL HLLVFTTDDV PHIALDGKLG GLVQPHDGQC 300
  301 HLNEANEYTA SDQMDYPSLA LLGEKLAENN INLIFAVTKN HYMLYKNFTA LIPGTTVEIL 360
  361 HGDSKNIIQL IINAYSSIRA KVELSVWDQP EDLNLFFTAT CQDGLSYPGQ RKCEGLKIGD 420
  421 TASFEVSVEA RSCPGRHTTQ SFTLRPVGFR DSLQVEVAYN CTCGCSAGLE PNSARCSGNG 480
  481 TYVCGLCECD PSYLGTRCEC QEGENQSGYQ NLCREAEGKP LCSGRGECSC NQCSCFESEF 540
  541 GRIYGPFCEC DSFSCARNKG VLCSGHGECH CGECKCHVGY IGDNCNCSTD ISTCRAKDGQ 600
  601 ICSDRGRCVC GQCQCTEPGA FGETCEKCPT CPDACSSKRD CVECSLLHQG KPDNQTCHHQ 660
  661 CKDEVITWVD SIVKDDQEAV LCFYKTAKDC VMMFSYTELP NGKSNLTVLR EPECGSAPNA 720
  721 MTILLAVVGS ILLVGMALLA IWKLLVTIHD RREFAKFQSE RSRARYEMAS NPLYRKPIST 780
  781 HTVDFAFNKF NKSYNGSVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle