YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109494401, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METKGNISAE EGGSVVLQCH FSSDTAEVTQ VNWEQRDQLL AVYSVDLGWY VPSVFSDRVV  60
   61 PGPSLGLTFQ SLTTNDTGEY FCTYHTYPDG IYKGRIFLKV QESSAHFQIA LPGGTMAAVL 120
  121 GLICLMATGV TVLARKKSIR MHSVESGLGR TEAEPQEWNL RILLSPSGPV QTQAAPADLC 180
  181 GEQTEDDYTD PQDYFNVLSY RSLESFIALS KTGQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	109	0.86
Transmembrane Helix	110	133	0.89
Cytoplasmic	134	214	0.90