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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149060405, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTPGPALL CPGGGKAQLS SASPPAAGLL LPAPTPPPLL LLLIPLLLFS RLCGALAGSI  60
   61 IVEPHVTAVW GKNVSLKCLI EVNETITQIS WEKIHGKSTQ TVAVHHPQYG FSVQGEYQGR 120
  121 ILFKNYSLND ATITLHNIGF SDSGKYICKA VTFPLGNAQS STTVTVLVEP TVSLMKGPDS 180
  181 LIDGGNETVA AVCIAATGKP VARIDWEGDL GEMESTITSF PNETATIISQ YKLFPTRFAR 240
  241 GRRITCVVKH PALEKDIRYS FILDIQYAPE VSVTGYDGNW FVGRKGVNLK CNADANPPPF 300
  301 KSVWSRLDGE WPDGLLASDN TLHFVHPLTF NYSGVYVCKV TNSLGQRSDQ KVIYISDPPT 360
  361 TTTLQPTVQW RSSTADVQDL ATEHKKLPFP LSTLATLKDD TIGTIIASVV GGALFVVLVS 420
  421 ILAGVFCYRR RRTFRGDYFA KNYIPPSDMQ KESQIDVLQH DEHDSYPDSV KKENKAPVNN 480
  481 LIRKDYLEEP EKTQWNNVEN LTRFERPMDY YEDLKMGMKF VSDERYNENE DDLVSHVDGS 540
  541 VISRREWYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle