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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498980
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVVGKDHNL CTEGEISRKT PEEDGHSALW LHADRKAARA VSGETEGQVP ETMGVKKVAV  60
   61 IGAGVSGLGA IKCCLDEGLE PTCFEKRSDI GGLWKYEEIS KSGNLGIYKS LTCNTSKEMT 120
  121 AFSDYPIPDH YPNYMHNSKM MEYLRMYARH FGLLKHIQFQ TKVCSIKKRP DFSSSGQWDV 180
  181 VVETGETQKT YIFDGIMVCS GHYTEKHFPL QDFEGISKFQ GSCLHSWEYK HPNSFSGKRV 240
  241 VVIGIGNSGA DVAGEISRVA DQVFLSTRRG AWVWSRVWDH GNPMDASLFT RYNRAVQKFC 300
  301 PRYLINRQME KKLNARFNHA NFGLLPQHRI LDHRTVFSDD LPSHIITGKV KIKTNVKTFT 360
  361 STSAVFEDGT EENIDVVIFA TGYKLAFPFL SDDSGILDSQ YSMFKYVFPP ELEKPTLAFI 420
  421 GIVQPAGAII PTSELQSRWV VRVFTGLQKL PPKKAMMADI YRKHQADKDA IKNLKDSSRR 480
  481 VQFIDYMDEI ASEIGVKPNL LSLLLWDTKL AKEIFYGPCT SYQYRLQGPG KWAGARAAIL 540
  541 TQRERILKPL RTRVVKHSRA SLSHLFWVKS VCVVSFFFIS VLVIMHLTSV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle