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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498145, gi...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKQIAIIG AGVSGLGAIK CCLEEGLEPT CFEKSNDIGG LWRYEETTER PGIYKSLTCN  60
   61 TSKEMTAFSD YPIPDHYPNY MHNSKMMEYL RMYARHFGLM KHIQFQTRVC RVRKRPDFSS 120
  121 SGQWDVVVEV DGKQKTYVFD GVMVCSGHST EKCLPLQDFA GISKFQGKYL HSWEYRHPDS 180
  181 FVGKRVVVIG IGNSGADVAG EISHVAEQVF LSTRRGAWIW NRVWDNGNPL DTTLFTRYNR 240
  241 TIQKFYPTFL INRWAENKLN ARFNHANYGL QAKHRFLSHQ SIFSDNLPNH IITGRVLVKP 300
  301 NVKEFTPTSA IFEDGSEEIV DNVVFATGYT FSFPFLDDSS KILDSEHTMF KFVFPPQLEM 360
  361 PTLAFIGILQ PVGATIPTSE LQSRWVTRVF TGLQKLPSQS NMMADINKRK RKMEKEFVKS 420
  421 PRGIHRVQYI DYMDEIASEL GVKPNLLSLF LWDTKLAKEI FWGPCTPYQY RLQGPGKWAG 480
  481 ARVAILTQRD RILKPLKTRV LKNCETSSSS LFWVRYICAV IVLFVPVLLI LLVIYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle