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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498800
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWKILPICL SMLLPVFLIQ QVSSQDISSC AGRCGEGYSR DATCNCDYNC QHYMECCPDF  60
   61 KRVCTTELSC KGRCFESFAR GRECDCDSQC KQYGKCCADY NSFCEEVHNP TSPPPKTAPP 120
  121 PPGASRTIKS TTKRSPKSPK KKTKKVVESE EITEEHSVSE NQESSSSSSS SSSTIRKIKS 180
  181 SKNSANRELQ KNPKVKDNKK NTPKKKPNPE PPVVDEAGSG LDNGEPKLTP PPDPPTPHNK 240
  241 VTASPKTTAA KPVTPKPSLA PNSETSKEAS STSNKETTVE TKETTETNKQ SSASKKEKTT 300
  301 SAKETRSAEN TSAKDVEPTS TTPKNSAPTT TKKPVTTTKE PVPTTTKGPE PTSKEPAPTT 360
  361 PKEPELTIPK EPAPTTKKPA PTTPKEPAPT TPKEPAPTTP KEPAPTTKKP EPTTPKEPAP 420
  421 TTPKEPAPTT PKEPAPNTPK EPAPTTPKEP APTTPKEPES TTPKEPAPTT PKEPAPTTPK 480
  481 EPAPTTPKEP APTTPKEPAP TTPKEPALTT PKEPAPTPKE PEPTTPKEPA PTTPKEPAPT 540
  541 TKKPELTIPK EPVPTTPKEP APTTPKEPAP TTTKKPELST PKEPTSTNPK EPEPTLPKEP 600
  601 ELTLPEEPEP SNPETSDELI AELAEAPTPK ALENNPKEPT VPTETPEVSK PEMTTAKEKT 660
  661 TEKDTTQTTT TVTPKTTTET TIIPEETTEP RASTTTRITS TAQDTTSPQM TTLKATTLAA 720
  721 KVTAPTEEIQ SKPEETTLTT PALEGSDASK TTLKPQKPTK APKKPASTKK PTKAPKKPTS 780
  781 TKKPKTPKGR KPKTTPSPLK TSTMSEQNTT PLEVMLPTTT VPKQTPNSET AEVNPAHEDA 840
  841 DGGEGEKPLI PRPPVLSPTA VPGTDLLVER LNPGINIHPM FSDETNICNG KPVDGLTTLR 900
  901 NGTLVAFRGH YFWMLNPFRP PSPPRRITEV WGIPSPIDTV FTRCNCEGKT FFFKDSQYWR 960
  961 FTNDVMDAGY PKLIVKGFGG LTGKIVAALS IAKYKDRPES VYFFKRGGNI QQYTYKQEPV1020
 1021 RKCTGRQPAI NYSVYGQAAQ VRRRRFERAV GPFQTHTFRI HYSVPIKASY QDKGFLHNEV1080
 1081 KVSTLWRGFP NVVTSAITLP NIRKPDGYDY YAFSKDQYYN IDVPTRTARA ITTRSGQTLS1140
 1141 RVWYNCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle