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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498476, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRARRRRQ FPAPLLALCV LLLPLQVTLQ VTLPCTQERH YEHLGRCCSR CEPGKYLSSK  60
   61 CTPTSDSVCL PCGPDEYLDT WNEEDKCLLH KVCDAGKALV AVDPGNHTAP RRCACTAGYH 120
  121 WNADCECCRR NTECAPGFGA QHPLQLNVDT VCTPCLLGFF SDVFSSTDKC KPWTNCTVLG 180
  181 KMEAHQGTTE SDVVCSSSLT LIKPPKEAQV YLPSLIVLLL FISVVVVAAI VFSIYYRKGG 240
  241 KTLTANLWNW VNDACSSLSG NKESSGDHCV GSHSANSSQQ EVCEGILLMT REEKMVPEDC 300
  301 AGVCGPVRAA SGPWAEGRDA RTFTLVSEVE TQGNLSRKIP TEDEYTDRPS QPPNGSLFLI 360
  361 QPGSRSTPPF QEPLEVGEND SLSQCFTGTE SMVDSEGCDF TEPPSRTDYM PASPEKLLTK 420
  421 EIEDDSCLPW VANSNSTDGY TGSGNTPGED HEPLPGSLKC GPLPQCAYSI GLPSEAAASL 480
  481 AEVGAQPQDR ADAKLPSSER GASGSGSSPS EQPPASGNVT GNSNSTFISS GQVMNFKGDI 540
  541 IVVYVSQTSQ EGPGPAEPEP EPEPVGRPVQ EETLAHRDSF AGTAPRFPDA CTTGAGLQEK 600
  601 GASRPKDWAS RPVQEQGGAQ ASLNTQGSGQ CAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle