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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498318
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAFVIDGK LMIVQYRTYG AVVTCMFLTV YLSNSEQHFT EVPVTPETVC RDVVDLCKEP  60
   61 GESDCHLAEV WCGSERPVAD NERMFDVLQR FGSQRNEVRF FLRHERPPNR DIVSGPRSQD 120
  121 AGVKRNGVKV PGEHRRKENG VNSPRLDLTL AELQEMASRQ QQQIEAQQQM LATKEQRLKF 180
  181 LKQQDQRQQQ QAAEQEKLKR LREIAESQEA KLKKVRALKG HVEQKRLSNG KLVEEIEQMN 240
  241 SLFQQKQREL VLAVSKVEEL TRQLEMLKNG RIDGHHDNQS AVAELDRLYK ELQLRNKLNQ 300
  301 EQNAKLQQQR ECLNKRNSEV AVMDKRVNEL RDRLWKKKAA LQQKENLPVS PDGNPPQQAV 360
  361 SAPSRVAAVG PYMQSSTMPR MPSRPELLGK PALPDSSLVM QSAEGPMKIQ TLPNMRSGAA 420
  421 SQSKGPKAHS ASSDWNPSST DLLPSQGSGS ALDQVDEGEI ALREKEKKVR PFSMFDTVDQ 480
  481 CAPPPSFGTL RKNQSSEDIL RDAQTVNKNV AKVPPPVPTK PKQINLPYFG QTAQSSSDVK 540
  541 PDGNPQQLPI AATSMGAKLK PAGPQARVLL SPSAPSGGQD QVLSPASKQE SPPAAAVRPF 600
  601 TPQPSKDTFP PAFRKPQTVA ASSIYSMYTQ HQVPGKNFQQ AVQSASTKTH PRGPHFSSVY 660
  661 GKPVIAAAQN PQQHPENIYS CSQGKPGSPE PETEPVSSVH ESHENERIPR PLSPTKLLPF 720
  721 LSNPYRNQSD ADLEALRKKL SNAPRPLKKR SSITEPEGPN GPNIQKLLYQ RTTIAAMETI 780
  781 SVPSYPSKSP SSVTVNPESP IEIPNPYLHV EPEKEAGSLV PEPLSPEDMG SASTENSDMP 840
  841 APPPGLECVS EGVPDNSTTL QDNTEGTNPE APHLLEVYLE EYPPYPPPPY PSGEPEVSEE 900
  901 DSARMRPPEV TGQVSLPPGK RTNLRKTGSE RIAHGMRVKF NPLALLLDSS LEGEFDLVQR 960
  961 IIYEVDDPSL PNDEGITALH NAVCAGHTEI VKFLVQFGVN VNAADSDGWT PLHCAASCNN1020
 1021 VQVCKFLVES GAAVFAMTYS DMQTAADKCE EMEEGYTQCS QFLYGVQEKM GIMNKGVIYA1080
 1081 LWDYQPQHDD ELLLKEGDCM AVVRREDEDE TEWWWARLND KEGYVPRNLL GVSRPNADHV1140
 1141 SCVINEAWYE LLCRGRAVY

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