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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498009
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAQELVHTV FLVALFHSSL AGVGTPQSES RAEEIPEGAS TLAFVFDVTG SMYDDLVQVI  60
   61 EGASKILETS LKRPKRPLYN FALVPFHDPE IGPVTITTDP KKFQYELREL YVQGGGDCPE 120
  121 MSVGAIKIAL EISLPGSFIY VFTDARSKDY RLTHEVLQLI QQKQSQVVFV LTGDCDDRNH 180
  181 IGYKVYEEIA STSSGQVFHL DKKQVNEVLK WVEEAVQASK VHLLSTDHLE HAVNTWKIPF 240
  241 DPSLKEVTVS LSGPSPVIEI RNPFGKLIKK GFGLNELLNI HNSAKVVNVK EPEAGMWTVK 300
  301 TSSSGRHSVR LTGLSTIDFR AGFSRKPTLD FKKTMSRPVQ GIPTYVLLNT SGISSPARVD 360
  361 RLELLSISGG SLKTIPVKHY PDRKPYGIWN ISDFIPPDEA FFLKVTGYDK EDYLFQRVSS 420
  421 VSFSSIVPDA PKVTMPTRTS GYYLQPGRIL CSVESLLPFT LSFVRNGIAL GVEQYLKESA 480
  481 SVPWDFPKVT LSDEGFYECI AMNSAGTGRA QTFFDVSEPP PIIQVPNNVT VTPGERAVLA 540
  541 CLVISAVDYN LTWQRSGRDV RLADSARIRT LANLSLELRS VKIGDAGEYR CVVSSEGGSA 600
  601 AASVFLTVQE KPKVTVMPRN QSFTGGSEVS IMCSATGYPK PKIVWTINEM FILGSHRYRM 660
  661 TAEGTLFIKN AVPKDAGTYS CLASNEAGTD EQTSTLRYIE APKLVVVQSE LLVALGDTTV 720
  721 MECKTSGIPP PQVKWFKGDL ELRPSTFLSI DPLMGLLKIQ ETQDLDAGDY TCVAANDAGR 780
  781 ATGSLTLDVG SPPVFIQEPS DVSMEIGSNV TLPCYVQGYP EPKIKWRRLD NMPVFSKPFS 840
  841 VSSISQLRTG ALFISNLWAS DKGTYICEAE NQFGKIQSQT TVTVTGLVKT EYNLFPSSGN 900
  901 LIASEYFTGS YELLVGPFLD NQWSKMGVML VQNPYITVRS DGSLHIERVR LQDGGEYTCV 960
  961 ASNVAGTNNK TTSVAVHVLP TIQHGQQILS TIEGVPVTLP CRASGIPKPS ITWSKKGELI1020
 1021 STGNAKFSAG ADGSLYVVSP GSEESGEYIC TATNAAGYAK RKVQLTVYVR PRVFGDQRGL1080
 1081 SQDKPVEISV LAGEEATLPC EAKSLPPPII TWAKDSQLIS PFSPRHTFLP SGSMKITETR1140
 1141 ISDSGMYLCV ATNIAGNVTQ SVKLSVHVPP KIQHGNRHLK VQVGQRVDIP CNAHGSPPPV1200
 1201 ITWFKSGRPM PFNGVQHPGS PDGMLTIEQT TLSDAGTYTC TATNIAGSDE AEVTLHVQEP1260
 1261 PTVEDLQPPF NTPFQERLAN QRMAFPCPAK GTPKPTIKWL HNGKEVTGQE PGVSILEDGA1320
 1321 LLVIASVTPL NNGEYICVAV NEAGTTERKY NLRVHVPPVI KDKEHVSNVS VLVNQLASLY1380
 1381 CEVEGTPSPV IMWYKDDIQV TESSTVQIVN NGKILKLFKA SAEDTGRYSC KAINIAGTSQ1440
 1441 KDFSVNVLVP PSIQGAGSPN EVSVVLNHNI TLQCPVRGTP FPAIHWFKDG KPLFLGDPNI1500
 1501 ELSDRGQNLH LRNARRSDKG RYQCSVSNAA GKQAKDIKLT LYVPPSIKGG NVTTEISALL1560
 1561 NSVVKLECET RGLPVPAITW YKDGQVVTSS SQALYIDKGQ FLHIPRAQVS DSATYTCHAS1620
 1621 NVAGTAEKSF HVDIYVPPII EGDLTTPSSK QVVVGQSLVL ECKAVGNPPP VLTWLKDGVP1680
 1681 VKASDNIHIE AGGKKLEILS ALEVDRGQYI CVATSVAGER EIKYEVDVLV PPAVEGGDET1740
 1741 SYFIVLANNL LELDCQVSGS PPPTIMWLKG GQLIDERDGF KILLSGRKLV IAQAQVSDTG1800
 1801 LYQCVATNVA GDRRKEFEVT VHVPPTIKSS DLPEKTVVRY KPVSLQCIAN GIPNPSITWL1860
 1861 KDDQPVNTAP GNLRIQSSGR VLQIAKALLE DAGRYTCVAT NAAGEAHQHT QLHVHEPPSL1920
 1921 DDGGKMLNES VVVNNPIQLE CKATGSPVPV LTWYKDSHPL AGSTSATFLK RGQILEIGSA1980
 1981 QISDAGIYKC VAINSAGATE LFYSLQVHVP PSISGSSSMV EVVVNNLARL ECEARGIPAP2040
 2041 SLTWLKDGSP VSSFSNGIQV LSGGRILALT SAQMSDTGRY TCVAVNAAGE KQRDFDLRVY2100
 2101 APPNIMGEEQ NVSVLISQTV ELFCQSDAVP PPTLMWFKDG RPLLKRPGLS ISENGSVLMI2160
 2161 EDAQAGDTGR YTCEATNVAG KTEKNYNVNI WVPPSIYGSD ELVQLTAIEG NLITLLCESS2220
 2221 GIPPPNLTWK KKGSLVLADA AGRVHILSGG RRLQISIAEK ADAGLYTCVA SNVAGIAKKE2280
 2281 YNLQVYIRPS IANSGSHRPE ITVIRGRSIS LECEVQGIPQ PTVTWMKDGR PLSKGKGVEI2340
 2341 LDEGRVLQLK NVHVSDTGRY VCVAVNVAGM TDKRYDLSVH VPPSIIGNHG VPENISVVEK2400
 2401 SSVSLTCEAS GIPLPSITWL KDGWPVSLGS SVKILSGGRM LRLMQTRPED AGQYTCIVRN2460
 2461 AAGEDRKMFG LSVLVPPHIV GDNTLEDIKI KEKQSVTLTC EVRGNPVPQI TWHKDGQLLQ2520
 2521 EDEVHHMMSG GRFLQITNAQ VSHTGRYTCL ASNIAGDKSK SFSLNVFVSP TIAGVDSDGS2580
 2581 PEDVIVILNS PTSLVCEAYS YPPATITWFK DGAPLESSRN LRILPGGRTL QILNAQEDNA2640
 2641 GRYSCVATNE AGEMIKHYEV KVYIPPIIKK GDLLGTGLSP KEVKIRVNSS LTLECEAYAI2700
 2701 PSASLRWYKD GQPLKSDHHV NIAENGHTLQ IKEAQISDTG RYTCVASNLA GEDELDFDVN2760
 2761 IQVPPSFQKL WEIGNMLDTG RSGEAKDVII NNPISLHCET NAAPPPTLTW YKDGRPLTSS2820
 2821 DRVLILPGGR VLQIPRAKVE DAGRYTCVAV NEAGEDSLQY DIHVLLPPVI KGANSDLPEE2880
 2881 VTVLVNKSAQ MECSSSGSPA PRNFWQKDGQ PLLEDEHHKF LSDGRVLQIL NAQITDTGRY2940
 2941 VCVAENTAGS AKKYFNLNVH VPPSVIGPNH EHLSVVVNHF ISLTCEVSGF PPPDLNWLKN3000
 3001 EQPIKPNTNV LIVPGGRTLQ IIRAKVSDGG EYTCVAINQA GESKKKVSLT VHVPPSIKDH3060
 3061 GSESLSIVNV REGTSVSLEC ESNAVPPPVI TWSKNGRMIP DSSNVAILTG GQMLHIRRAE3120
 3121 VADTGQYVCR AINVAGRDDK NFHLNVYVPP TIEGPETEVI VETMSNPVTL TCDATGIPPP3180
 3181 TITWLKNHKP IENSDPLEAH ILSGGSKLQI ARLQRSNRGN YTCVASNMEG KAQKNYILSI3240
 3241 QVPPSVAGAE VPSEVSVLLG ENVELVCDAD GIPIPRLQWL RDGKPIVSGE TERVRVTTDG3300
 3301 STLNIYRALT SDMGKYTCVA TNPAGEEDRI FNLNVYVPPK IRGNKEEAEK LMALVDTSLN3360
 3361 IECKATGTPP PQISWLKNGL PLPISSHIRL LSAGQAIRIV RAQVSDVAVY TCVASNRAGI3420
 3421 DSKRYSLQVF VPPNMDNAMG TEEITLVKGS STSMTCFTDG APTPSMSWLR DGQPLALDAH3480
 3481 LTIGTQGMVL QLIKADTEDT GKYTCVASNE AGEVSKHFVL KVLEPPHING SEGPGEVSVI3540
 3541 VNNPLELSCI ASGIPAPKIS WMKDGRPFLQ TEQVQTLEGG AILRVSSAQV EDTGRYTCLA3600
 3601 SSPAGDDDKE YLVRVHVPPN IAGVDEAQDF TVLRNRQVTL ECKSDAVPPP VIMWLKNGEQ3660
 3661 LQATPRVRIL SGGRYLQINN ADLGDTANYT CVASNIAGKT TREFILTVNV PPSISGGPQS3720
 3721 LVTLLNKSIA LECLAEGVPS PRITWRKDGV VLAESHARYS ILENGFLHIQ SAHITDTGRY3780
 3781 LCMATNVAGT DRRRIDLQVH VPPSIAAGPT NVTVTVNVQT TLACEATGIP KPSINWRKDG3840
 3841 HLLNVDQNQN SYRLLSSGSL IIISPSVDDT ASYECTVTSD AGEDKRTVDL TVQVPPTIAD3900
 3901 EPMDFLVTRQ APAVMTCSAS GVPLPSIHWT KNGIRLLPRG DGYRILSSGA IEISAAQLNH3960
 3961 AGRYTCIARN AAGSVHRHVT LRVQEPPFIQ PQPSELDVIL NNPILLPCEA TGIPTPFITW4020
 4021 QKEGINVITS GKSLAVLPSG SLQISRAVQG DAGTYMCVAQ NPAGTALGKI KLNVQVPPAI4080
 4081 SSHQKEYVVT MDKPVSLLCE TEGSPPPDIT WHKDGHALTE SIRQRILNSG ALQIAFAQPD4140
 4141 DAGQYTCMAA NMAGSSSMST TLTVHVPPRI QSTEVHYTVN ENSQVVLPCV ADGIPTPAIH4200
 4201 WERDSVLLAN LLGKYTAQPY GELVLENVVL EDAGTYTCVA NNAAGEDTHT VTLTVHALPT4260
 4261 FTELPGDLSL NKGEQLRLSC KAVGIPLPKL TWTFNNNIIP AHFDSVNGHS ELVIEKVSKE4320
 4321 DSGTYVCTAE NSVGFVKAIG FVYVKEPPVF KGDYPSNWIE PLGGNAILNC EVKGDPAPTI4380
 4381 QWSRKGADVE ISHRIRQLGN GSLAIYGTVN EDAGDYTCVA ANEAGVVERS MSLTLQSSPM4440
 4441 ITLEPVETIV DAGGRVTLDC QAAGEPQPTI TWSRQGRPIP WDNRLTMLPN SSLYIAAARK4500
 4501 EDTSEYECVA RNLMGSVLVR VPVIVQVHGG FSLWSAWRSC SVTCGKGIQK RSRLCNNPPP4560
 4561 ANGGRPCQGS ESEARQCQNK LCPVDGHWSE WSFWEECSRS CGHGNQTRTR TCSNPPAQHG4620
 4621 GRPCEGYAVE TIMCNIRPCP VHGVWNAWQP WGSCSKSCGK GSQTRTRLCN SPPPSFGGAY4680
 4681 CNGAETQMQV CNERHCPVDG KWAAWTSWST CTVSCGGGTR KRTRDCSDPV PQYGGNKCEG4740
 4741 TGVQSDFCNS DPCPTHGNWS PWSGWGMCSR TCNGGQMRRY RTCDNPRPSN GGRACGGPDT4800
 4801 QIQRCNTDMC PVDGSWGTWH SWSHCSVSCG GGERTRKRLC DNPVPSKSGR SCPGDATQVS4860
 4861 RCNMQACPGG PQRARGSVIG NINDIEFGIA FLNATITDSP NSDTRIIQAT ITNVPRSLGP4920
 4921 AMRKIISILN PIYWTTAKEI GEAVNGFTLT NAVFKRETQV EFATGEVLRM THVARGLDSD4980
 4981 GALLLDVIVS GHVLQLHSPA EVSVKDYTED YIQTGPGQLY AYSTRLFTID GISVPYTWNH5040
 5041 TIFYDQAWGK MPFLVETLHA SSVESDYNQL EETLGFKIHA SISKGDRSNQ CPSGFILDSA5100
 5101 GPFCADEDEC TAGNPCSHTC HNAIGAYYCS CPKGLTIAAD GRTCQDIDEC ALGGHTCHAG5160
 5161 QDCDNTIGSY RCVVHCGTGF RRTSDGLSCQ DINECQESSP CHQRCFNVIG SFHCGCEAGY5220
 5221 QLKGRKCIDV NECRQSVCRP DQHCKNTRGG YKCIDLCPSG MTKAENGTCI DIDECKDGTH5280
 5281 QCRYNQICEN TRGSYRCACP RGYRSQGVGR PCVDINECDQ VPKPCAHQCS NSPGSFKCIC5340
 5341 LPGQHLLGDG KSCAGLERLS SYGTQYSSYD LERFSPVRSG YQPRQHTRQQ SQLYSSYSEY5400
 5401 RNSRASFSRS RRTIRKTCPE GSEANHETCV DIDECQNRDT CQHECKNTIG SYQCVCPPGY5460
 5461 RLMLNGKTCQ DVDECLEQNV RCGXXRMCFX XRGSYQCIDT XXPPNYQXDP VLGFCLKNCP5520
 5521 PNDLECTLSP YALEYKLVSL PFGIAANQDL IRLVAYTQDG VMHPRTTFLM VDEEPAVPFA5580
 5581 LRDENLKGVV YTTRPLREAE TYRMKVRALS YSANGTIEYQ TTFIVYIAVS AYPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle