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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109497968
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMKLKKTAY LLALYLSSSL LICVKRRHCE EDIDECLPNP CLNGGTCQNL PGNYTCHCPF  60
   61 DDTSRTFYGG EDCSEILLGC THHQCLNNGK CIPHFQNGQH EFTCQCPSGY AGPLCETVTT 120
  121 LSFESNGFLW VTSGSHTSMG SECNISLKFQ TVQPNALLLV RGNKDMSVKL ELLDGCVHLS 180
  181 IEVWNQSKVL LYISHNTSDG EWHLVEVTFA ETITLALNGS SCKEKCTTKS SVSIENHQSI 240
  241 CALQNSFLGG LPMGTASDSM SVLNIYNVPS TPSFVGCLQD IRFDLNHITL ESISSGLSSN 300
  301 VKAGCLRKDW CESQPCQNRG RCINLWQGYR CECDRPYAGS NCLKAFYPTQ KCRSVCRDVN 360
  361 PFKEAVLSDR TFESYLELPG AEYVAGRFGQ DDSTGYAAFK VNDNFGQNFN LSMFVRTRQP 420
  421 LGFLLTLGNS TYQYVCVWLE HGSLALKTPG SPKLVANFFL SDGNAHLISL RIKPNEIELY 480
  481 QSSQNLGFMS VPAWTIQRGD VIFIGGLPDR EKTEAYGGFL KGCIQDVRLN SQNLEFFPNS 540
  541 TNSAQHDPVL VNVTQGCPGD NVCKSNPCHN GGVCHSLWDD FSCSCPTNTS GRACDEVQWC 600
  601 QLSPCPPIAE CQLVPQGFEC IANAAFSGLS SEILFRSNGN ITRELTNITF GFRTQDTNAV 660
  661 ILHAEKEPEF LNISIQDSRL LFQLRSGNSF YTLHLTGSQL VNDGAWHRVT FSMIDPRAQT 720
  721 SLWQMEVDDQ TPFVISAVAT GNLNFLKDNT DIYVGDQAVD NQKGLQGCLS TVQIGGLYLS 780
  781 YFESLHGFTS KPQEEQFLKV STNVALTGCL PLSACHSSPC LHGGICEDSY SSYRCACLPG 840
  841 WSGAHCEINV DECSSSPCVH GNCSDGVAAY HCRCEPGYTG GNCEAEVDTC KSHQCANGAT 900
  901 CVSGAQGYSC LCLGNFTGRF CRHSRLPSTV CGNEKTNFTC YNGGSCSVFQ EDWKCVCRPG 960
  961 FTGEWCEENI NECASDPCIN GGLCRDLVNR FQCICDVAFA GERCELDVSG LSFYVSLLLW1020
 1021 QNLFQLLSYL ILRMNDEPEL ADDRLVGIIT AVGSGTLVLL FILLLAAIVS LIASNKRATQ1080
 1081 GTYSPSGQEK AGPRVEMWSR MPPPALERLI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle