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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109497066
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRALLCWA SLATALEETL LNTKLETADL KWVTYPQAEG QWEELSGLDE EQHSVRTYEV  60
   61 CDMKRPGGQA HWLRTGWVPR RGAVHVYATI RFTMMECLSL PRASRSCKET FTVFYYESEA 120
  121 DTATAHTPAW MENPYIKVDT VAAEHLTRKR PGAEATGKVN IKTLRLGPLS KAGFYLAFQD 180
  181 QGACMALLSL HLFYKKCSRL VTNLTYFPET VPRELVVPVA GSCVANAVPT ASPSPSLYCR 240
  241 EDGQWAEQQV TGCSCAPGYE AAEGNKVCRA CGQGTFKPQI GEEPCLPCPA NSHSNNIGSP 300
  301 VCLCRIGYYR ARSDPRSSPC TTPPSAPRSV VHHLNGSSLR LEWSAPLESG GREDLTYAVR 360
  361 CRECRPGGSC LPCGGDLTFD PGPRDLVEPW VAIRGLRPDV TYTFEVAALN GVSTLATGPP 420
  421 PFEPVNVTTD REGRTGFLSP AVPPAVSDIR VTRSSPSSLI LSWAIPRAPS GAVLDYEVKY 480
  481 HEKGAEGPSS VRFLKTSENR AELRGLKQGA SYLVQVRARS EAGYGPFGQE HHSQTQLDES 540
  541 ESWREQLALI AGTAVVGVVL VLVVIIIAVL CLRKQSSGRE VEYSDKHGQY LIGHGTKVYI 600
  601 DPFTYEDPNE AVREFAKEID VSYVKIEEVI GAGEFGEVCR GRLKAPGKKE SCVAIKTLKG 660
  661 GYTERQRREF LSEASIMGQF EHPNIIRLEG VVTNSVPVMI LTEFMENGAL DSFLRLNDGQ 720
  721 FTVIQLVGML RGIASGMRYL AEMSYVHRDL AARNILVNSN LVCKVSDFGL SRFLEENSSD 780
  781 PTYTSSLGGK IPIRWTAPEA IAFRKFTSAS DAWSYGIVMW EVMSFGERPY WDMSNQDVIN 840
  841 AIEQDYRLPP PPDCPTSLHQ LMLDCWQKDR NARPRFPQVV SALDKMIRNP ASLKIVAREN 900
  901 GGASHPLLDQ RQPHYSAFGS VGEWLRAIKM GRYEESFAAA GFGSFEVVSQ ISAEDLLRIG 960
  961 VTLAGHQKKI LASVQHMKSQ AKPGAPGGTG GPTQQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle