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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062947, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRALLCWA SLATALEETL LNTKLETADL KWVTYPQAEG QWEELSGLDE EQHSVRTYEV  60
   61 CDMKRPGGQA HWLRTGWVPR RGAVHVYATI RFTMMECLSL PRASRSCKET FTVFYYESEA 120
  121 DTATAHTPAW MENPYIKVDT VAAEHLTRKR PGAEATGKVN IKTLRLGPLS KAGFYLAFQD 180
  181 QGACMALLSL HLFYKKCSRL VTNLTYFPET VPRELVVPVA GSCVANAVPT ASPSPSLYCR 240
  241 EDGQWAEQQV TGCSCAPGYE AAEGNKVCRA CGQGTFKPQI GEEPCLPCPA NSHSNNIGSP 300
  301 VCLCRIGYYR ARSDPRSSPC TTPPSAPRSV VHHLNGSSLR LEWSAPLESG GREDLTYAVR 360
  361 CRECRPGGSC LPCGGDLTFD PGPRDLVEPW VAIRGLRPDV TYTFEVAALN GVSTLATGPP 420
  421 PFEPVNVTTD REVPPAVSDI RVTRSSPSSL ILSWAIPRAP SGAVLDYEVK YHEKGAEGPS 480
  481 SVRFLKTSEN RAELRGLKQG ASYLVQVRAR SEAGYGPFGQ EHHSQTQLDE SESWREQLAL 540
  541 IAGTAVVGVV LVLVVIIIAV LCLRKQSSGR EVEYSDKHGQ YLIGHGTKVY IDPFTYEDPN 600
  601 EAVREFAKEI DVSYVKIEEV IGAGEFGEVC RGRLKAPGKK ESCVAIKTLK GGYTERQRRE 660
  661 FLSEASIMGQ FEHPNIIRLE GVVTNSVPVM ILTEFMENGA LDSFLRLNDG QFTVIQLVGM 720
  721 LRGIASGMRY LAEMSYVHRD LAARNILVNS NLVCKVSDFG LSRFLEENSS DPTYTSSLGG 780
  781 KIPIRWTAPE AIAFRKFTSA SDAWSYGIVM WEVMSFGERP YWDMSNQDVI NAIEQDYRLP 840
  841 PPPDCPTSLH QLMLDCWQKD RNARPRFPQV VSALDKMIRN PASLKIVARE NGGASHPLLD 900
  901 QRQPHYSAFG SVGEWLRAIK MGRYEESFAA AGFGSFEVVS QISAEDLLRI GVTLAGHQKK 960
  961 ILASVQHMKS QAKPGAPGGT GGPTQQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle