YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109496584
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVQLAQWQ KTLPQRRTWN IVTPPHPPPG IGALVLAIYG YTFYSVAQEH FLDELEDEAK  60
   61 DARARALERE REHQDPNWTG PKCSSGDVLP MSLCSQPPQG CGALPSSLCA RPNFCGQQDF 120
  121 KMASIVPLKE KKLMEVKLRE LPSWILMRDF TPSGIAGAFR RGYDRYYNKY INVRKGSISG 180
  181 INMVLAAYVV FSYCISYKEL KHERRRKYH

Type	Start	End	Confidence
Cytoplasmic	1	20	0.64
Transmembrane Helix	21	41	0.55
Non-Cytoplasmic	42	177	0.84
Transmembrane Helix	178	197	0.64
Cytoplasmic	198	209	0.64