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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109496527
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSGGGLPPP SVAASPSSSS LAAAVAVAVA ASSGVGGVPG GPAAGVKLKY CRYYAKDKTC  60
   61 FYGEECQFLH EDPASGAAPG LGLHSNSVPL ALAAASGAGF PPGALPGGGA GPPAGPKKPE 120
  121 LGVPGAATAG GGLDGPRVAI PGMDGGALTD TSLTDSYFST SFIGVNGFGS PVETKYPLMQ 180
  181 RMTSSSSSPS LLNDSAKPYT GHDPLTSSAS SLFNDFGALN ISQRRKTPNP TASEFIPKGG 240
  241 STSRLSNVSQ SNMSAFSQVF SHPSMGSPAT AGLAPGMSLS AGSSPLHSPK ITPHTSPAPR 300
  301 RRSHTPNPAS FMVPPSASTP ANNPVPQTPS SGQVIQKETV GGTTYFYTDT TPAPLTGMVF 360
  361 PNYHIYPPTA PHVAYMQPKA NAPSFFMADE LRQELINRHL ITMAQIDQAD LPAVPTEVDS 420
  421 YHSLFPLEPL PPPNRIQKSS NFGYITSCYK AVNSKDDLPY CLRRIHGFRL VNTKCMVLVD 480
  481 MWKKIQHSNI VTLREVFTTK AFSEPSLVFA YDFHAGGETM MSRHFNDPNS DAYFTKRKWG 540
  541 QHDGPLPRQH AGLLPESLIW AYIVQLSSAL RTIHTAGLAC RVMDPTKILI TSKTRLRVNC 600
  601 VGVFDVLTFD NSQNNNPLAL MAQYQQADLI SLGKVVLALA CNSLAGIQRE NLQKAMELVT 660
  661 INYSSDLKNL ILYLLTDQNR MRSVNDIMPM IGARFYTQLD AAQMRNDVIE EDLAKEVQNG 720
  721 RLFRLLAKLG TINERPEFQK DPTWSETGDR YLLKLFRDHL FHQVTEAGAP WIDLSHIISC 780
  781 LNKLDAGVPE KISLTSRDEK SVLVVTYSDL KRCFENTFQE LIAAANGNDR SSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle