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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109496338, gi...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAAEGAGE LQVPAAPAAA LGRPLSLLGS AWRGRWAEGA ASGAGERWGF LQAWGGETPA  60
   61 GQPECSQAGQ GRGASDPVPE SARGSTSRMR RSVLVRNPGH KSLRPLYGDL PSDPEDLDPS 120
  121 PKAPDRISES PEPEPEDLNT VSEDGDASLE DPEPEAEEAP PSMLGKPDLD SRDLDPTSSS 180
  181 FDLDPDVIGP VPLVLDPSDD TLSPAAPHVD SLPSSLTATP EILATSSAVV LPAPASPPRP 240
  241 FSCPDCGRAF RRSSGLSQHR RTHSGEKPYR CPDCGKSFSH GATLAQHRGI HTGARPYQCA 300
  301 ACGKAFGWRS TLLKHRSSHS GEKPHHCPVC GKAFGHGSLL AQHLRTHGGP RPHKCPVCAK 360
  361 GFGQGSALLK HLRTHTGERP YPCPQCGKAF GQSSALLQHQ RTHTAERPYR CPHCGKAFGQ 420
  421 SSNLQHHLRI HTGERPYACP HCSKAFGQSS ALLQHLHVHS GERPYRCQLC GKAFGQASSL 480
  481 TKHKRVHEGA AAAAAAAAAA AAGLGLGPGL SPVSMMRPGQ ISFLGPDAVS VLGSGLGLSS 540
  541 GASPARSSAP TSVLGSLQNP LLQTHSGSVS SPDLVLSSDP KPGLDADPDV VPSPDQELDP 600
  601 NPNPDLVPNP DSRPKSQTDP YSPTHDSPSP ALPAGESPKW VKEEGALLGP DG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle