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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109494955, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLPKDCR LPDLLPSPKQ SMEAPLQTGM VLGVMIGAGV AVLVTAVLIL LVVRRLRVQK  60
   61 TPAPEGPRYR FRKRDKVLFY GRKIMRKVSQ STSSLVDTSV STTSRPRMKK KLKMLNIAKK 120
  121 ILRIQKETPT LQRKEPPPSV LEADLTEGDL ANSHLPSEVL YMLKNVRVLG HFEKPLFLEL 180
  181 CRHMVFQRLG QGDYVFRPGQ PDASIYVVQD GLLELCLPGP DGKECVVKEV VPGDSVNSLL 240
  241 SILDVITGHQ HPQRTVSARA ARDSTVLRLP VEAFSAVFTK YPESLVRVVQ IIMVRLQRVT 300
  301 FLALHNYLGL TNELFSHEIQ PLRLFPSPGL PTRTSPVRGS KRVVSTSGTE DTPKETSGRP 360
  361 LDPTGAPLPG PAGDPVKPTS LEAPSAPLLS RCISMPVDIS GLQGGPRSDF DMAYERGRIS 420
  421 VSLQEEASGG PQTASPRELR EQPAGACEYS FCEDESATGG CPFGPYQGRQ TSSIFEAAKR 480
  481 ELAKLMRIED PSLLNSRVLL HHAKAGTIIA RQGDQDVSLH FVLWGCLHVY QRMIDKAEEV 540
  541 CLFVAQPGEL VGQLAVLTGE PLIFTLRAQR DCTFLRISKS DFYEIMRAQP SVVLSAAHTV 600
  601 AARMSPFVRQ MDFAIDWTAV EAGRALYRQG DRSDCTYIVL NGRLRSVIQR GSGKKELVGE 660
  661 YGRGDLIGVV EALTRQPRAT TVHAVRDTEL AKLPEGTLGH IKRRYPQVVT RLIHLLSQKI 720
  721 LGNLQQLQGP FPGSGLSVPQ HSELTNPASN LSTVAILPVC AEVPMMAFTL ELQHALQAIG 780
  781 PTLLLNSDII RARLGASALD SIQEFRLSGW LAQQEDAHRI VLYQTDTSLT PWTVRCLRQA 840
  841 DCILIVGLGD QEPTVGQLEQ MLENTAVRAL KQLVLLHREE GPGPTRTVEW LNMRSWCSGH 900
  901 LHLRCPRRLF SRRSPAKLHE LYEKVFSRRA DRHSDFSRLA RVLTGNTIAL VLGGGGARGC 960
  961 SHIGVLKALE EAGVPVDLVG GTSIGSFIGA LYAEERSASR TKQRAREWAK SMTSVLEPVL1020
 1021 DLTYPVTSMF TGSAFNRSIH RVFQDKQIED LWLPYFNVTT DITASAMRVH KDGSLWRYVR1080
 1081 ASMTLSGYLP PLCDPKDGHL LMDGGYINNL PADIARSMGA KTVIAIDVGS QDETDLSTYG1140
 1141 DSLSGWWLLW KRLNPWADKV KVPDMAEIQS RLAYVSCVRQ LEVVKSSSYC EYLRPSIDCF1200
 1201 KTMDFGKFDQ IYDVGYQYGK AVFGGWTRGE VIEKMLTDRR STDLNESRRA DILAFPSSGF1260
 1261 TDLAEIVSRI EPPTSYVSDG CADGEESDCL TEYEEDAGPD CSRDEGGSPE GASPSTASEV1320
 1321 EEEKSTLRQR RFLPQETGAQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle