YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109495182
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGPPASSPL PMPLLLLLLL TVGSARAAPL PQTGAGDAPV VEVPSLFVIL SVCSLMVLIV  60
   61 LIANCVSCCK DPEIDFKEFE DNFDDEIDFT PPAEDTPSVQ SPAEVFTLSV PNISLPAPSQ 120
  121 FQSSVEGLKS QVARHSLNYI QEIGNGWFGK VLLGETYTGT SVTRVIVKEL KVSASPKEQD 180
  181 TFLNSGEPYY ILQHPNVLQC VGQCVEAIPY LLVFEFCDLG DLKAYLHNEQ EHVRSESQTM 240
  241 LLQRMACEIA AGLAAMHKLH FLHSDLALRN CYLTSDLNVK VGDYGIGFSR YKEDYIETDD 300
  301 KKIFPLRWTA PELVTSFQDR LLTADQTKYS NIWSLGVTLW ELFNNAAQPY ANLSDLDVLN 360
  361 QVIRERDMKL PKPQLELPYS ERWYEVLQFC WLSPDKRPAA EDVHRLLTYL RMQSQRDSEV 420
  421 DFEQQWTALK PNANSRDPSS SAAFPILDHF ARDRLGREME EVLTVTETSQ GLSFEYVWEA 480
  481 AKHDHFDEQG RGHPDEALSY SSMFFPVEVF ENSLSDPGPG KQDGSGQEGP LRAPGVVPVF 540
  541 DAHNLSVGSD YYIQLEEKSS SSLGLEYPPA LLTTEVDNPE KGGTDAPHLT AFKTLVSEEP 600
  601 SAEEDFFQSS ARPKEANSAE DSHAASIPGS PFNIFSDLDK ADDLPSHQKI FDLMELNGVQ 660
  661 ADFKPAILSP SLDGPKDTCQ SEREKPHDQD PLCFPESPVH QDCFDPLSVQ ELSENFLFLQ 720
  721 EKNLLKGSLP GKGRVNDLQT ELKDAGFISE MLESPRRGSV SSGLELLEHT LDFPSSQENM 780
  781 SGQNKGTGGT PQGATSPQAS PLTEGSPNGP PDSVLKSGET KPFTGVSVPE NSVCLDLSPD 840
  841 PVTGPVEIPA ADAKAPDGGD GPPEVTCQSK EALNPTKRDP ILENEITAQG SMETCLPESG 900
  901 QDLQNQPFSE DPLSGSILEK NSEAVETLNQ LNYKAAPKDA ALASALSSDS TSQDSLLEDS 960
  961 LSTPIPTSEQ SVETPDSLDS VDVHAALLES LGSHTPQKLL PPDKPADSGY ETENLESPEW1020
 1021 TLHPAPEGTA DSDTAAAGDS SHSSLPPNPV IVISDAGDGH RGAEGPPQSF SLGTQSSYRD1080
 1081 SAYFSDNDSE PDKKPEEAPG TSASALVLVK DQLPPEPVAP EDSPDDVREG CLEASQSKPE1140
 1141 QSPASALQNS CHSELQETLQ PTPADQTGAS RETYPVDDEA RGPLGLLNSE FSSCDDLETQ1200
 1201 EDRPCTLAST GTNTNELLAY TGSTLDKSLP SHFEGPKLKE PDIEGKYLGK LCVSGMLDLS1260
 1261 EDGMDADEED ENSDDSDEDL RAFNLHSLSS ESEDDMEHPV PIIVSNDDGR HLRSLLKPSA1320
 1321 AAAIEQLPDD WKKEKKAVTF FDDVTVYLFD QETPTKELGH CGGEAHGPGP SSPAASTGSP1380
 1381 YLSRCMNSES STDEEGGGFE WDDDFSPDPF MSKTTSLLGS KPSLQTSKYF SPPPPARSSE1440
 1441 QSWPHVSPCS RFSISPANIA SFSLTHLTDS DIEQGDSKAA KIGAGVSVSP DNVNAATLPT1500
 1501 LHSLPVPISV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle