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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109494070
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRASKPRDPP ASGAAQRSLC GSVQTLRAAG LPEASAHPAA AEMPGHRGAP HLPPWVCGLC  60
   61 SMDDFAEGGL SLADDILLED YPYEDDCICT PDFTTDDYVR VTQLYYEGVG MQYKDYAQSE 120
  121 KNLEYDICNI WCSKPLSILQ DYCDAIKLYI FWPLLFQHQH SSIISRLHPC VEAIRSRAAE 180
  181 ISLKKLQHLE LMEDIVDLAK KVANDSFLIE GLLKIGYKIE NKILAMEDAL NWIKYTGDVT 240
  241 ILPKLGSVDS GWPMLSIFFT EYKYHITRVV TENCNLLEEF RRHSCMQCVK QGELMKMRGN 300
  301 EEFAKEKFEI AVIYYTRAIE YRPENHLLYG NRALCFLRMG QFRNALSDGK RAIVLKNTWP 360
  361 KGHYRYCDAL SMLGEYDWAL QANIKAQKLC KNDPEGIKDL IQQHIKLQKQ IEDLQGRTSN 420
  421 RNPIKAFYES RAYIPRNSSA PAFRTSLNFV ETERGFRKTK YRMANGGGHQ NQKVADEALK 480
  481 GDDCDCHPEF LPPPSQPPRH KGKQKSRNNE SEKPSSNSQV TLQVDLKSIL EKQFSKSSRA 540
  541 AHQDFANIMK MLRSLIQDGY TALLEQRCRS AAQAFTELLN GLDPQKIKQL NLAMINYVLV 600
  601 VYGLAVSLLG IGRPEELSEA ENQFKRIIEH YPNEGLDCLA YCGIGKVYLK KNRFLEALNH 660
  661 FEKAKTLICR LPGILTWPTS NVIIEESKPE KVKVMLEKFV EECKFPPVPD AVCCYQKCRG 720
  721 FSKIQIYLTD PDFKGFIRIS CCQYCKVEFH MNCWKKLKTT TFNDKIDKDF LQGICLTPDC 780
  781 EGIISKIIIF SSGGQVKCEF EHKVVKEKAP SRPVLKQKCS SLEKLRLKED KKLKRKIQKQ 840
  841 EAKKLAQERM EEDLRESNPP KPEEPEETVE SAQSCQFLDD RILQCIKQNA DKIKSVVLNT 900
  901 STLLKELLSW KVLSTEDYTT CFSSKNFVHE AVDYVIGHLI QEKNRVKTRI FLHVLSELKE 960
  961 LDPKLAPWIQ RLNSFGLDAT GPFFTRYGAS LKELDFNIVT FLWSEKYGHK LGSIEGKQLD1020
 1021 YFCEPASVME ARCLIWLLEE HRDKFPALHS ALDEFFDIMD SRCTVLRKQD SDEMPFGCIK1080
 1081 VKNKGKKKKP KDSKPMLVGS GTASVTPSSE TVTPEDHNRR NSDSAGPFAV PDHLRQDVEE1140
 1141 FEALYDQHSS EYVVRNKKLW DINPKQKCST LYDYFSQLLE EHGPLDMSDR MFSEEYEFFP1200
 1201 EETRQILEKA GGLKSFLLGC PRFVVIDNCI ALKKVASRLK KKRKKKNIKT KVEEISKTGE1260
 1261 YLRVKLPLNP TAREFQPDVK SEAAAEDVTS IPGPADSSAP AAEDLKPQLD SDSSSGSASE1320
 1321 DSRLEVVSPD LPTPLCEDAS PSPTPAPEDA KPTYWTQSHL VTGFCTYLPF QGFGIAQSRP1380
 1381 AYINMVPSLS QFTSIYTPLA NISSEYPMPR SMPVVPSFVA SERADGNAAA YFESHRLNTE1440
 1441 NASDDHTASE TQILEGPLGM CVKSQSSTAD ARTALSEPEG NSRHSGSSDS LWEASLENVS1500
 1501 GITDVPPAPS VAIQVSRSLI HQEVNTEPYA PFERQQGDLS QKEKECHLLR EQLQVACEEC1560
 1561 EQMELRSSQE TRDLEEKLQR HAEENKISKT ELDWFLQDLD REIKKWHQEK KEIQERLKAL1620
 1621 KKKIKKVINT SDMSAQKNDG LDKECESQPD QSLGISSALT DEKAKVEESV RKGKELYEES1680
 1681 QQRAVAAEVS VLENWKEREV CKLQGVATQA EACLKSLKLM NSDSAAYPDV ECDILSWETF1740
 1741 LSTVTEEIEN TKCQFEEQIK AIKSGSRLSD LSSVQVSELL FPACSMIHPQ LLSESSRHED1800
 1801 HGLVACVDSM TGAVLNDPYV GPDSGCSEEV PELSLGSPTH HPEGAQQLEV KKASQVSPSE1860
 1861 QNPEADEKPS GQATRSSQSQ KNPFNSIIEH LSVIFPCYAS SELSGFIKKV RNKSKNSFSG1920
 1921 LSIEEIVERV TEHIVEEQKK KKPNPGKDKK TSEAHPAASV SKSSPSPPLA AAGPSAKTKG1980
 1981 QKKDDVPAPD GNSCQICHEI FKSKNMRVLK CGHKFHKGCF KQWLKGQSTC PTCGSSDLLS2040
 2041 EE

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