YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109492339
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRPAVACCL LLLVLGLYGA HSRNVLLIVA DDGGFESGVY NNTAINTPHL DALARHSLIF  60
   61 RNAFTSVSSC SPSRASLLTG LPQVSVASGM KGAEWIGGGD SRPGLCRWET LLSPGSSFLI 120
  121 SLASVGGGIG LVLQELRGAG VLNDTLIIFT SDNGIPFPSG RTNLYWPGTA EPLLVSSPEH 180
  181 PQRWGQVSDA YVSLLDLTPT ILDWFSIPYP SYAIFGSKTI QLTGRSLLPA LEAEPPWATV 240
  241 FSSQSHHEVT MSYPMRSVYH QNFRLIHNLS FKMPFPIDQD FYVSPTFQDL LNRTAAGQPT 300
  301 GWYKNLQHYY YRERWELYDI SRDPRETRNL AAEPDFAQVL EVLKAQLVKW QWETHDPWVC 360
  361 APDGVLEEKL TPQCRPLHNE L

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	381	0.98