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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109489377, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVRTLAALT LAVLPLTVAP ASLEKDEGVS LPVQRRGLVG AGLKAGPQGA GPTPAAGGVR  60
   61 SSSSPESSRG CGAGAGATAG ARGRVGIRGR AGAGSIDMGS ADSKLNFRKA VIQLTTKTQP 120
  121 VEATDNAFWD QFWADTATSV QDVFALVPAA EIRAVREESP SNLATLCYKA VEKLVQGAEG 180
  181 GCHSEKEKQV VLNCSRLLTR VLPYIFEDPD WRGFFWSTVP GAGRGGGEEE DENARPLAES 240
  241 LLLAIADLLF CPDFTVQNHR RNDVDSAEDV HSLDSCEYIW EAGVGFAHSP QPNYIHDMNR 300
  301 MELLKLLLTC FSEAMYLPPS PESGSTNPWV QFFCSTENRH ALPLFTSLLN TVCAYDPVGY 360
  361 GIPYNHLLFS DYREPLVEEA AQVLIVTLDH DSATSTSPTV DGTTTGTVMD DADPPGPENL 420
  421 FVNYLSRIHR EEDFQFILKG IARLLSNPLL QTYLPNSTKK IQFHQELLVL FWKLCDFNKK 480
  481 FLFFVLKSSD VLDILVPILY FLNDARADQS RVGLMHIGVF ILLLLSGERN FGVRLNKPYS 540
  541 VRVPMDIPVF TGTHADLLIV VFHKIITSGH QRLQPLFDCL LTIVVNVSPY LKSLSMVTAN 600
  601 KLLHLLEAFS TTWFLFSASQ NHHLVFFLLE VFNNIIQYQF DGNSNLVYAI IRKRGVFHQL 660
  661 ANLPTDPPSI HKALQRRRRT PEPLSRAGSQ EGASMEGSRP AAPAEPGTLK TSLVATPGID 720
  721 KLTEKSQVSE DGTLRSLEPE SQQNSAEGSP SEGEPNQTWR EQRRLSNASA SGQWSPTSDW 780
  781 ILSWKSKLPL QTIMRLLQVL VPQVEKICID KGLTDESEIL RFLQHGTLVG LLPVPHPILI 840
  841 RKYQANSGTA MWFRTYMWGV IYLRNVDPPI WYDTDVKLFE IQRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle