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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149053912, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAAATWIPL LAGLLAGLRD SKAQQTTLHP LVGRVFVHPL EHATFLRLPE HIAVPPTVRL  60
   61 TYHAHLQGHP DLPRWLHYTQ RSPYNPGFLY GTPTPEDRGH QVIEVTAYNR DSFDTTRQRL 120
  121 LLLIGDPEGP RLPYQAEFLV RSHDVEEVLP STPANRFLTA LGGLWEPGEL QLLNITSALD 180
  181 RGGRVPLPIE GRKEGVYIKV GSATPFSTCL KMVASPDSYA RCAQGQPPLL SCYDTLAPHF 240
  241 RVDWCNVSLV DKSVPEPLDE VPTPGDGILE HDPFFCPPTE ATGRDFLTDA LVTLLVPVLV 300
  301 ALLLTLLLVY IMCCRREGRL KRDMATSDIQ MFHHCSIHGN TEELRQMAAS REVPRPLSTL 360
  361 PMFNVRTGER LPPRVDSAQM PLILDQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle