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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109491312, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGLVFSLL LFWTREIQGS TLDPAGQHVC IGSSPSELQC CSGWRQKDQE CTIPICEGPD  60
   61 ACKKDEVCVK PGLCRCKPGF FGAHCSSRCP GQYWGPDCRE TCPCHPRGQC EPATGVCQCQ 120
  121 PNYWGKLCEF PCTCGPHGKC DPKTGLCHCD PGWWSPTCRR PCQCNPLARC DQVTGACICP 180
  181 TGWWGHRCSF SCNCHTSPCL QDSGRCTCLQ GWWGPECSRR CQCVRGQCSV TSGHCSCPPG 240
  241 FQGALCELPC KPGRYGAQCK ESCGHCEPNA TCSPVTGNCE SCKPGWNGTQ CKQPCPPGTF 300
  301 GERCTGKCPR CRLEEPCQVE TGHCQRCDPG PHGKNALIVG ILVPLLLLLM GIICCVYCCS 360
  361 ASRLDPKDRP ERNGAAFFRM KQQVWGALTS LGSALPCGSL SNYKLPWVTV SHHDPEVPFN 420
  421 HSFIEPPSAG WASDDSFSSD PDSGEEDEAH AYFMPPREET VPMTQEESPA ASLPGGPFPP 480
  481 PEDASTPFPI PRTSSLARAK RPSVSFAEGT KFAPQNGRSS GDLSSPIRKP KRLSRGAQPR 540
  541 PEGQEAEEST GPEQENPEED VPTATSSGDA ATSHGQLPPG SRTVTECVET TDGGIQESSG 600
  601 SVATIYMLAG TPQKPEGPVW SVFRRLGNYQ KDQAAPKVKS AIPKPLRRSL GRNQASSGLS 660
  661 QSSGSAPGAV LSGAMESTAV KPEEASRGLG DGIESLGTVQ EPVVGSSSPE QGSQKQAEEQ 720
  721 EQEEPLYENV VPMLQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle