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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109487990, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEPQQVSAL PPPPMQYIKE YTDENIQEGL APKPPPPIKD SYMMFGNQFQ CDDLIIRPLE  60
   61 SQGIERLHPM QFDHKKELRK LNMSILINFL DLLDILIRSP GSIKREEKLE DLKLLFVHVH 120
  121 HLINEYRPHQ ARETLRVMME VQKRQRLETA ERFQKHLERV IEMIQNCLAS LPDDLPHSEA 180
  181 GMRVKTEPMD TDDNSNCTGQ NEQQRESSGS LENAYTAEVG KNAYLPCSYT VPAPGTLVPI 240
  241 CWGKGSCPLL QCASVVLRTD ETNVTYRKSR RYQLKGNFYK GDMSLTIKNV TLADSGTYCC 300
  301 RIQFPGPMND EKLELKLSIT EPAKVIPAGT AHGDSTTASP RTLTTEGSGS ETQTLVTLHD 360
  361 NNGTKISTWA DEIKDSGETI RTAVHIGVGV SAGLALALIL GVLILKWYSS KKKKLQDLSL 420
  421 ITLANSPPGG LVNAGAGRIR SEENIYTIEE NIYEMENSNE YYCYVSSQQP S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle