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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109488203
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFWSPFERS SFHSSSHSTP ALSSGSLLAT FSSEWIHVHP SLKSVANVTP KPPSHYPSST  60
   61 VVKVSRLSNV FPSGQHPVPN CQETPRSLHL CPGCRHLALG SNLTRGLPVP PHRSFWLRYS 120
  121 TGVPTAPRAQ PSPRRAPGPP REPSSSAAAA GAQLGFRPAP GAGRAAVAAR PARSPERDGQ 180
  181 PPRRGKMLDG SLLARWLAAA FGLTLLLAAL RPSAAYFGLT GSEPLTILPL TLETEAAAQA 240
  241 HYKACDRLKL ERKQRRMCRR DPGVAETLVE AVSMSALECQ YQFRFERWNC TLEGRYRASL 300
  301 LKRGFKETAF LYAISSAGLT HALAKACSAG RMERCTCDEA PDLENREAWQ WGGCGDNLKY 360
  361 SSKFVKEFLG RRSSKDLRAR VDFHNNLVGV KVIKAGVETT CKCHGVSGSC TVRTCWRQLA 420
  421 PFHEVGKHLK HKYETSLKVG STTNEATGEA GAISPPRGRA SGSGGGDPLP RTPELVHLDD 480
  481 SPSFCLAGRF SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC 540
  541 TQREEVYTCK G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle