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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109488103
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVGVVRPQR TEAGWDGGVA PRAGPTRRRE ACTAYVQRVA GGSGLPEGSS GSEPGPGRSR  60
   61 ERPGDAAGGS GNAGCCACPV VSETGGDWLT DSTNRAFSVP GDFQGRRQAE GKTQKVRVQS 120
  121 TGKVPPFPVM KLQVLVLLMS WFGVLSWVQA EFFTSIGHMT DLIYAEKDLV QSLKEYILAE 180
  181 EAKLSKIKSW ASKMEALTSK SAADPEGYLA HPVNAYKLVK RLNTDWPALG DLVLQDAAAG 240
  241 FVANLSVQRQ FFPTDEDESG AARALMRLQD TYKLDPDMIS RGELPGTKYQ AMLSVDDCFG 300
  301 MGRSAYNEGD YYHTVLWMEQ VLKQLDAGEE ATVTKSLVLD YLSYAVFQLG DLHRAVELTR 360
  361 RLLSLDPSHE RAGGNLRYFE RLLEEERGKS LSNQTDAGLA SQENLYERPV DYLPERDVYE 420
  421 SLCRGEGIKM TPRRQKRLFC RYHHGNRVPQ LLIAPFKEED EWDSPHIVRY YDVMSDEEIE 480
  481 RIKEIAKPKL ARATVRDPKT GVLTVASYRV SKSSWLEEDD DPVVARVNRR MQHITGLTVK 540
  541 TAELLQVANY GMGGQYEPHF DFSRSDERDA FKRLGTGNRV ATFLNYMSDV EAGGATVFPD 600
  601 LGAAIWPKKG TAVFWYNLLR SGEGDYRTRH AACPVLVGCK WVSNKWFHER GQEFLRPCGT 660
  661 TEVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle