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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109487628
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSGTGVAL LVLLASVLWV TVRSQQRGLF PAILNLATNA HISANATCGE KGPEMFCKLV  60
   61 EHVPGRPVRH AQCRVCDGNS TNPRERHPIT HAIDGTNNWW QSPSIQNGRE YHWVTVTLDL 120
  121 RQVFQVAYVI IKAANAPRPG NWILERSVDG VKFRPWQYYA VSDTECLTRY KITPRRGPPT 180
  181 YRADNEVICT SYYSKLVPLE HGEIHTSLIN GRPSADDPSP QLLEFTSARY IRLRLQRIRT 240
  241 LNADLMTLSH RDLRDLDPIV TRRYYYSIKD ISVGGMCICS GHASSCPWDE EAKVCSSRTC 300
  301 GDQRETHGPQ LHEIKVFFNW VTSPVFIEIF KYFLECNCHN KAKDCYYDNN VAKERKSLNT 360
  361 AGQYSGGGVC INCLQNTTGI NCETCIDQYY RPHKVSPYED QPCRPCDCDP VGSLSSVCIK 420
  421 DDLHADLANG KWPGQCPCRK GYAGDKCDRC QFGYRGFPNC VPCDCSTVGS VNEDPCTEPC 480
  481 LCKKNVEGEN CDRCKPGFYN LKERNPEGCS ECFCFGVSDV CDSLTWSVSQ VTNMSGWLVT 540
  541 DLISPNKIRS QQDALGRHRQ ISINNTAVMH RFTSPYYWAA PEAYLGNKLT AFGGFLKYTV 600
  601 SYDIPVETVD SNLMSHADVI IKGNGLTIST RAEGLSLQPY EEYFNVVRLV PENFRDFNTR 660
  661 REIDRDQLMT VLANVTHLLI RANYNSAKMA LYRLDSVSLD IASPNAIDLV VAADVEHCEC 720
  721 PQGYTGTSCE ACLPGYYRVD GILFGGICQP CECHGHSSEC DIHGICSGCT HNTTGDHCEQ 780
  781 CLPGFYGTPS RGTPGDCQPC ACPLSIDSNN FSPTCHLTDR EEVVCDQCAP GYSGAWCERC 840
  841 ADGYYGNPTV PGGTCVPCNC SGNVDPLEAG HCDSVTGECL KCLWNTDGAH CERCADGFYG 900
  901 DAVTAKNCRA CNCHENGSLS GICHLETGLC DCKPYVTGQQ CDQCLPGYYG LDTGLGCVPC 960
  961 NCSGEGSISD NCTEEGQCHC VPGVSGKQCD QCSHGFYAFQ NGGCTPCDCA HTQNNCDPDS1020
 1021 GECLCPPHTH GLKCEQCEEA FWGLDPEQGC QACNCSVVGS TSPQCDVLSG QCSCKEGFGG1080
 1081 QSCHQCSLGY RSFPDCVPCD CDLRGTLADT CDLEQGLCSC TEDSGTCSCK ENVLGPQCDK1140
 1141 CRAGTFALRA DNPLGCSPCF CFGLSQLCSE LEGYVRAPIT LASDQPILHV VSQSNLKGTT1200
 1201 EGVHFQPPDT LLDAEAVRQH IYAEPFYWRL PKQFQGDQLL AYGGKLQYTV AFYSTLGTGT1260
 1261 SNYEPQVLIK GGRTRKHIIY MDAPAPENGV RQDYEVGMKE EFWKYFNSVS EKHVTHSDFM1320
 1321 SVLSNIEYIL IKASYGQGLQ QSRIANISME VGRKAVEPAP EGKVALQLEL CVCPPGTAGH1380
 1381 SCQDCAPGYH RGKLPESSGR GPRPLLAPCV PCNCNNHSDV CDPETGKCLN CRDHTAGDHC1440
 1441 ELCTAGYYGK VIGLPGDCTP CTCPHHPPFS FSPTCVLEGD SGFWCDACLP GYEGQYCERC1500
 1501 SAGYHGNPRA AGGSCQKCDC NPQGSVHSDC DRASGQCVCK PGATGLHCEE CLPRHILMES1560
 1561 HCVSCDDECV GALLNDLDSI GDAVLSLNLA GVSLAPYGTL ENLENTTKYF QGYLLEENAK1620
 1621 KVQAEIQLGG IEEQTENLQK ELARVLRSHQ QVNTAMERTS NRSQALATFL EQLHRNIKEI1680
 1681 TEKVATLNQT TGEDFQPPVS ALQSLHQNIS SLLALIKKRN FTEMRQNATL ELKAAKDLLS1740
 1741 RIQKRFQKPQ EKLKALKEAS SLLSNHIADL QAAEELLREA GSKTQESSLL LLLVKANLKD1800
 1801 FREKKLHVQE EQNLTSKLIA QGREWVDAAR THAAAAQDTL TQLEHHRDEL LLWASKIRSH1860
 1861 VDDLVMQMSK RRARDLVHRA EQHASELQSA AEALDRDLEN VRNVSLNATS AVHVHTNIQT1920
 1921 LTEEAESLAA DAHKTANKTS LISESLAPRG KAVLQRSSRF VKESVSTRKK QQGITLKLDE1980
 1981 LKNLTSQFQE RVDNITRQAN DSLTVLRESP GGMREKSRKV KELAVAANET AARTLEDMLG2040
 2041 LSLRVFNTSE DLSRVNATVQ ETKDLLHNST MTTILAGRKM RDMEMQANLL FDRLKPLKML2100
 2101 EENLSRNLSE IKLLISRARK QAASIKVAVS ADRDCIRAYQ PQISSTNYNT LLLNVKTQEP2160
 2161 DNLLFYLGSS SSSDFLAVEM RRGKAAFLWD LGSGSTRLEF PDVSINNDKW HSIYITRFGN2220
 2221 MGSLSVKEAS AAEDPPVRTS KSPGLANVLD INNSTLMFVG GLGGQIKKSP AVKVTHFKGC2280
 2281 MGEAFLNGKS IGLWNYIERE GKCNGCFGSS QNEDASFHFD GSGYAVVEKA LRPTVTQIII2340
 2341 LFSTFSPNGL LFYLASNGTK DFLSIELLRG RVKVMVDLGS GPLTLMTDRR YNNGTWYKIA2400
 2401 FQRNRKQGLL AVFDAYDTSD KETKQGETPG AASDLNRLEK DLIYVGGLPH SKAVRKGVSS2460
 2461 RSYVGCIKNL EISRSTFDLL RNSYGVRKGC TLEPIQSVSF LKGGYMEMPP KSLSPESSLL2520
 2521 ATFATKNSSG VILAALGKDA EKAGASQAHV PFFSILLIEG RIEVHINSGD GTSLRKALLH2580
 2581 APTGSYSDGQ EHSISVVRNR RVITVQLDEN SPVEMKLGPL TEGRTINISN LYIGGLPEGK2640
 2641 GTPMIRMRTS FHGCIKNVVI DAQLLDFTRA AGSEQVELDT CLLAEEPTQG LHREHGELPP2700
 2701 EPPTLPEPEL CAVDTAPGYV AGAHQFGLSQ NSHLVLPFNQ SDVRKRLQVQ LNIRTFASSG2760
 2761 LIYYVAHQNQ MDYAVLQLHE GRLNFMFDLG KGRTKVSHPA LLSDGKWHTV KTEYIKRKAF2820
 2821 MTVDGQESPS VTVVGNATTL DVERKLYLGG LPAHYRARSI GTITHSIPAC IGDVTVNSQQ2880
 2881 LDKDRPASAF AVDRCYAVAQ EGTFFEGSGY AALVKEGYKV RLDLNITLEF RTSSKNGVLL2940
 2941 GISSAKVDAI GLEIVDGKVS FHVNNGAGRI TATYKPRATR TLCDGKWHTL HAHKSRHRIV3000
 3001 LTVDGDAVRA ESPHTHSTSA DTNDPIYVGG YPAHVKQNCL SSRASFRGCV RNLELSRGSQ3060
 3061 VQSLDLSRAF DLHGVFPHSC PGPEP

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