YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157818063, gi...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELGYQREGD GAREISYLLS PKLPGTTLDG TLSSSSRKND SQEGAHPSEA LSGSNTLEES  60
   61 AVPGSRCCHN GGTCVLGSFC VCPAHFTGRY CEHDQRHRDC GALGHGAWTL HSCRLCRCIF 120
  121 SALYCLPRQT FSHCDLKSFL SSGARGSRAC SIPRLLLLVL CLLLQVVCGW

Type	Start	End	Confidence
Cytoplasmic	1	149	0.72
Transmembrane Helix	150	168	0.72
Non-Cytoplasmic	169	170	0.79