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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109485725, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPWPLTFLL FLLLLLWLQG CDSGSSSEKL YRKVQRREGE TLSVQCSYKN RRNLVEAKSW  60
   61 CKVKRKKCEH SFTRSWVRGP SYSMRDDTKA KVVRITMEAL RVQDSGRYWC MRNTAGNLYP 120
  121 LVGFQLEVYP ALTTERNVPP THLTNTLKDG FANTPMDEFV TTSQVHMSDT GDPFTTNVTV 180
  181 FSSGLHTLAS GTTAPTPVTR YSFADTSGTI TETERSTESQ PATVSPSHTR PFLADSVTTS 240
  241 TMTRHQSSSL STTGTCHQLT PNRSQETHRP VMVVVLTFLP APMLLVVAYG FWKKRHMGRY 300
  301 NLDSNYAKSW LHLPEGPETL WKPACSKITQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle