YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109486671
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPGPGDGEE AEEEEETYRT RAGSQLEDPS LDPSASAGPH EFRRRENRYL KQCIPLIWGA  60
   61 ALLLGLLVVA VVLFAVMARK KGNRLGVCGP SQNTGNSGMD PSSAAHHRSD SGLPSDIPHM 120
  121 RLDSPPSFDS IYTDPSLDPP SRKPPAPPPE PPLPPKVLTS SKPVTYATVV FPGRGKGEKA 180
  181 SGEPAQDLPN RQTPPSK

Type	Start	End	Confidence
Cytoplasmic	1	53	0.72
Transmembrane Helix	54	77	0.93
Non-Cytoplasmic	78	197	0.73