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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109486528
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRGELGNS HLRRLKQSPR ILRVLFVSER WGFGVLVWSR VVEPWMIQSL SQEEVLYTLH  60
   61 MEERHTKKQF FLENVPEGDL LQDSKASAGN EVIDLSDAAS NSTNLSPYGK DTTKEMEYNI 120
  121 LVNFFKTMCY SQEIVEKVIR EYGPSTEPLL LLEETEKDNK RLQKDRDFPP GAVYPEDSQS 180
  181 RSAGGWEQHK RAHNRFHSKE STVTQSKIRW KDFLSYCSKT LNNVSQIAEL IFSKQFPDDP 240
  241 FRRNGRWLEE FLKKEVFLRA MQPVLNALPS VGMFDPDFRS PSTQVANTSR QPPSWIRRLQ 300
  301 ALGFLSSPSS HPWPPYPCQH RDCSWRPAPV PPYTYTPLNL LKDGTVVSVC GVVKFFKPPY 360
  361 LSKGTDYCSV VTIVDQTHVK LTCMLFSRNC ETLPIIYKVG DIVCFRGLKI QAYKNELQGI 420
  421 STRGFASLTF DGTLGAPVVS RTLSKSFNFT AQDYNMVETL RTWASTHISA SSNLVQLSNA 480
  481 EPMQYYDLTC QLLGKAEVDG VSFLLKVWDG TRTKIPSWRL CLQDMAFEGD LSHILRLQNL 540
  541 VIDVVVYDNH VQVAKSLKIG SFLRIYSLHT KLQPVNSESP TSLVRLEFHL HGGTSYGRGI 600
  601 RVLPESNYDV NQLKKSLESV DLEAIQTSDD TYQSDNENCS SPESDSVSLY EMERCQQLCA 660
  661 TKLTDYHCLE KTSLCAILKQ SAPRQYRIIA KLRSYMPRRL LQSVKLLCPK CHLLQEVPYD 720
  721 ENVDKILQDA SGKAPDYKLH GTPLYDSEVW TTKGQEGRQV AVHFVKNDGI LPHSSECLVL 780
  781 IEGGRLCEIY KLSSMFHSVI PVKSGPEDLE LLDLAAPFLI RGKVCHYGCN QCSNLKSIQN 840
  841 LSTIPNKRLW LPSSVAEALG IVPLQYVFVM TFTFDDGTGV LDVYLKDSDK FFQIPASEVL 900
  901 TDDDLQRNLE RIMNVICPPG IKIDAYPWLE CLIKSYNVTS GTEHQICYQI FDTMVAEDIL 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle