YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109485922
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIPKASYAR IRNPSPGRPW LTSPVMTYVK KQTLWARCPS TQSLFTSAAQ LLIHLWSGQL  60
   61 REGDGAREIS YLLSPKLPGT TLDGTLSSSS RKNDSQEGAH PSEALSGSNT LEESAVPGSR 120
  121 CCHNGGTCVL GSFCVCPAHF TGRYCEHDQR HRDCGALGHG AWTLHSCRLC RCIFSALYCL 180
  181 PRQTFSHCDL KSFLSSGARG SRACSIPRLL LLVLCLLLQV VCGW

Type	Start	End	Confidence
Cytoplasmic	1	203	0.61
Transmembrane Helix	204	222	0.64
Non-Cytoplasmic	223	224	0.80