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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109485400
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTAGGGPG AAAGAVGAGG AAAASGLAVY RRKDGGPASK FWESPDTVSQ LDSVRVWLGK  60
   61 HYKKYVHADA PTNKTLAGLV VQLLQFQEDA FGKHVTNPAF TKLPAKCFMD FKAGGTLCHI 120
  121 LGAAYKYKNE QGWRRFDLQN PSRMDRNVEM FMNIEKTLVQ NNCLTRPNIY LIPDIDLKLA 180
  181 NKLKDIIKRH QGTFTDEKSK ASHHIYPYPS SQEDEEWLRP VMRRDKQVLV HWGFYPDSYD 240
  241 TWVHSNDVDA EIEDAPIPEK PWKVHVKWIL DTDVFNEWMN EEDYEVDENR KPVSFRQRIS 300
  301 TKNEEPVRSP ERRERKASAN ARKRKHSPSP PPPTATESRK KSGKKGQASL YGKRRNQKDE 360
  361 DEQEDLTKDM EDPTPVPNIE EVLLPKNVNP KKDSENTPVK GGTVADLDEQ DEEAVTTGGK 420
  421 EDEDPSKGDP SRSADAGEDN VTEQTNHIII PSYASWFDYN CIHVIERRAL PEFFNGKNKS 480
  481 KTPEIYLAYR NFMIDTYRLN PQEYLTSTAC RRNLTGDVCA VMRVHAFLEQ WGLVNYQVDP 540
  541 ESRPMAMGPP PTPHFNVLAD TPSGLVPLHL RSPQVPAAQQ MLNFPEKNKE KPIDLQNFGL 600
  601 RTDIYSKKTL AKSKGASAGR EWTEQETLLL LEALEMYKDD WNKVSEHVGS RTQDECILHF 660
  661 LRLPIEDPYL ENSDASLGPL AYQPVPFSQS GNPVMSTVAF LASVVDPRVA SAAAKAALEE 720
  721 FSRVREEVPL ELVEAHVKKV QEAARASGKV DPTYGLESSC IAGTGPDEPE KLEGSEEEKM 780
  781 ETDPDGQQPE KAENKGENES DEGDKIQDGE NEKNSEKERD SDTSEDVKPE EKENEENKEL 840
  841 TDTCKERESD TGKKKVEHEI SEGNVATAAA AALASAATKA KHLAAVEERK IKSLVALLVE 900
  901 TQMKKLEIKL RHFEELETIM DREKEAVSKG NSHGYVLKMK ANVPFRDRSY IV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle