YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109485398
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTAGGGPG AAAGAVGAGG AAAASGLAVY RRKDGGPASK FWESPDTVSQ LDSVRVWLGK  60
   61 HYKKYVHADA PTNKTLAGLV VQLLQFQEDA FGKHVTNPAF TKLPAKCFMD FKAGGTLCHI 120
  121 LGAAYKYKNE QGWRRFDLQN PSRMDRNVEM FMNIEKTLVQ NNCLTRPNIY LIPDIDLKLA 180
  181 NKLKDIIKRH QGTFTDEKSK ASHHIYPYPS SQEDEEWLRP VMRRDKQVLV HWGFYPDSYD 240
  241 TWVHSNDVDA EIEDAPIPEK PWKVHVKWIL DTDVFNEWMN EEDYEVDENR KPVSFRQRIS 300
  301 TKNEEPVRSP ERRERKASAN ARKRKHSPSP PPPTATESRK KSGKKGQASL YGKRRNQKDE 360
  361 DEQEDLTKDM EDPTPVPNIE EVLLPKNVNP KKDSENTPVK GGTVADLDEQ DEEAVTTGGK 420
  421 EDEDPSKGDP SRSADAGEDN VTEQTNHIII PSYASWFDYN CIHVIERRAL PEFFNGKNKS 480
  481 KTPEIYLAYR NFMIDTYRLN PQEYLTSTAC RRNLTGDVCA VMRVHAFLEQ WGLVNYQVDP 540
  541 ESRPMAMGPP PTPHFNVLAD TPSGLVPLHL RSPQPCPGAA SHLIGLRRLT FAFHSSISLG 600
  601 SKQMIQKLKP IDLQNFGLRT DIYSKKTLAK VKSKGASAGR EWTEQETLLL LEALEMYKDD 660
  661 WNKVSEHVGS RTQDECILHF LRLPIEDPYL ENSDASLGPL AYQPVPFSQS GNPVMSTVAF 720
  721 LASVVDPRVA SAAAKAALEE FSRVREEVPL ELVEAHVKKV QEAARASGKV DPTYGLESSC 780
  781 IAGTGPDEPE KLEGSEEEKM ETDPDGQQPE KAENKGENES DEGDKIQDGE NEKNSEKERD 840
  841 SDTSEDVKPE EKENEENKEL TDTCKERESD TGKKKVEHEI SEGNVATAAA AALASAATKA 900
  901 KHLAAVEERK IKSLVALLVE TQMKKLEIKL RHFEELETIM DREKEALEQQ RQQLLTERQN 960
  961 FHMEQLKYAE LRARQQMEQQ QHGQPPQQAH QHPGGPGLAP LGAAGHPGMM PHQQPPPYPM1020
 1021 MHHQMPPPHP PQPGQIPGPG SMMPGQPMPG RMIPTVAANI HPTGSGPTPP GMPPMPGNIL1080
 1081 GPRVPLTAPN GMCK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle