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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109483894, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLPPEEAL RPLVWRESRF LVLALPGTAA LTSGWGRRRG RGLRAGLAPD PSRRPAGRAP  60
   61 PDLVPVGPRA PPSSAMSRND QEPFFVKFLK SSDNSECFFK ALESIKELQS EEYLQVITDE 120
  121 EALRIKENDK SLYICDRFSG TAFDHLKQLG CRIVGPQVVT FCMRHQQCVP RAEHPVYNMI 180
  181 MSDITISCTS LDKDKREEVH KYVQMMGGRV YRDLNVSVTH LIAGEVGSKK YLVAANLKKP 240
  241 ILLPAWIKTL WEKSQEKKIT KYTDVNMEDF KCPIFLGCII CVTGLNGIHR KTVQQLTAKH 300
  301 GGQYMGQLKM NECTHLIVQE PKGQKYECAR RWNVHCVTLQ WFHDSIEKGF CQDESIYKAE 360
  361 PRAAVKTVPD TSTPTAQSGS AAAENHRLAD VSHISNINGS CVNETMFGST TSKLECTLEN 420
  421 LENLDISMFQ APEDLLDGCR IYLCGFSGRK LDKLRRLINS GGGVRFNQLN EDVTHVIMGD 480
  481 YEDDVRQFWS KSSHRPHVVG AKWLLECFSK GYILPEESYI HANYQPDGIP VSDQPRNQTT 540
  541 VLEKSGTFSK KDFVPNEKFQ QTDEDLLAQY VHDDSTIVEA KLSEAIEPEV GPCGGSAHVE 600
  601 PCDDSTHISV QEENKSSVSH CLLDGSTVPE EGLFSQKSFL VLGFSVENEC NIVNIIREHA 660
  661 GKIVSLPSRI VADYAVVPLL GCEVEATVAE VVTNTWLVTC IDNQTLVDPK SNPLFTPVSV 720
  721 MSGMTPLEDC VISFSQCVGA ERDSLVFLAN HLGASVQEFF VRKSNAKKGM LASTHLIVKE 780
  781 PTGSKYEAAK KWSLPAVNIS WLLETARMGK RADENHFLVD SAPKQEQVLE TNIPNGVSPN 840
  841 PDSPAHPDAH LEIHRQKAVT PLDMNRFQSK AFHAVISQHN RQGLASPPVR QPPKKEPSFH 900
  901 LDTPSKFLSK DKLFKPSFDV TDALAALETP NAASQKRKLS SPLSEVIVRN LTTALANSSR 960
  961 NTGCLSASPQ LKGAHLEKEE TPKPLDKVVV CVSKRLSKKQ SELNGVAASL GAEYRWSFDE1020
 1021 TVTHYIYQGR ANDSNREYKS AKERGVHVVS EHWLLECAQE YKHLPESLYP HTYNPKMSLD1080
 1081 ISTVQDGRLC DSRLPSALSA SKDDEPDHLS VEENATETLG THSRESALLN GNGRDDCKGA1140
 1141 LTQALEMREN FQKQLQEIMS ATSIVRTPAQ KTCMSRSSCN SASSTPDSTR SARSGRSRVL1200
 1201 EALRQSRQIV PDINTEPSQN EQIIWDDPTA REERARLASN LQWPSYPTQY SELQVEIKKL1260
 1261 DDSPSRKPVY HSEIAGQASC VTQAPGQHPG SEEPEAPAAE RNLIPEPQAP SVAFPLAKPP1320
 1321 VAPQPEDKIE TLEETHGKLK KQYVFQMSSL NSQERIDYCR LIKDLGGSVI EKQCSDPSCT1380
 1381 HMVVGYPLRN EKYLASMAAG KWVLHRSYLD ACRTAGRFVQ EEDYEWGSSS ILDALPDVTE1440
 1441 HQQKLALAAM RWRKRIQQSR ESGIAEGAFS GWKVILRVDR PREAGFKRLL QAGGAKVLPG1500
 1501 HPEPLFKDAT HLFCDFNKLK PDDCRVFIAE ATAQNMVCLK TEYIADYLMM ESPPCADNYR1560
 1561 VSETALFRNK EGGPGLPQKR KTPAENVIKR PRVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle