YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823195, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATKTWVLS FLVLEVTTVL GRQMMLTQSA RRVQPVKRTP KILTKPVNSQ ESPGEWTTWF  60
   61 NIDHPGGQGD YERLDAIRFY YGERVCARPL RLEARTTDWM PAGITGQVVH GSPREGFWCL 120
  121 NKEQRPGQNC SNYTVRFLCP PGSLRRDTEH IWSSWSPWSA CSAACGHTGV QTRTRTCLAQ 180
  181 TVSLCNEATE EGQLCMSQAC TACDLTCPMG QVNADCDACM CQDFMLHGAI SLPGGGPAPG 240
  241 ATVYLLAKAP KMLTQTDSSG SFRVPGLCPD GKTVLKVTKS KFAPIMITMP KTSLKSATIN 300
  301 AEFVRAETPY IVMNPETKAR RAGQSVSLCC KATGKPSPDK YFWYHNNTLL DPSLYKHQSK 360
  361 LVLRNLQQDQ AGEYFCKAQS DAGAVKSKVT QLTVIAHDEA PCNPTPESYL IRLPHDCFQN 420
  421 ATNSFYYDVG RCPIKTCAGQ QDNGIRCQDA VENCCGISRT EEREIQCSGY TLPTKVAMEC 480
  481 SCQRCAETRS IVRGRVTAAD DGEPMRFGHV YMGNNRVSMT GYKGTFTLHV PQDTERLVLT 540
  541 FVDRLQKFVN TTKVLPFNKK GSAVFHEIKM LRQKEPITLE ATETNIIPLG EVAGEDPVAE 600
  601 LEIPPKSFYK QNGEPFTGKV KASVTFLDPR NVSTATATQS DLNFINDEGD TFPLRTYGMF 660
  661 SVDFRDEATS ESLNAGKVKV HLDSTQVKMP EHARAMKLWS LNPNTGLWEE EGDFKFESQR 720
  721 RNKREERTFL VGNMEIRERR LFNLDVPESR RCFIKVRTYR SERFLPSEQI QGVVVSVINL 780
  781 EPRTGFSSNP RAWGRFDSVI TGPNGACLPA FCDDQSPDAY SVYVLASLSG EELEAVESSP 840
  841 KFNPNAIGVP QPYLNKLKYR RTDHEDPRVK KTAFQISMAK PRPNSAEESN GPIYAFENLR 900
  901 ACEEAPPSAA HFRFYQIEGD RYDYNTVPFN EDDPMSWTED YLAWWPKPME FRACYIKVKI 960
  961 VGPLEVNVRS RNMGGTHRQT VGKLYGIRDV KSTRDRDQPN VSSACLEFKC SGMLYDQDRV1020
 1021 DRTLVKVIPQ GSCHRASVNS MLHEYLVNHL PLAVNNDTSE YTMLAPLDPL GHNYGIYTVT1080
 1081 DQDPGTAKEI ALGRCFDGTS DGSSRIMKSN VGVALTFNCA ERQVGRQSAF QYLQSTPARS1140
 1141 PATGTVQGRV PAMRQQRASR GGLRRRGSMA PLRFSGVAQQ PLSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle