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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109484624
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLTVRVSW TLPGPAHPLH PSLPDFLNRI TTATSGSGYG GGGGSDGSSE LSEAGNSLPR  60
   61 ELERRIPVES LSGLEKHESL VDLEVPEDPI DPEYPIGPED PIDPEDPIDP EYPIGPEDSI 120
  121 DPEDPIGPED PIDPEYPIGP EDPIDPEYPI GPEDSIDPED PIDPEYPIGP EDPIDPEDPI 180
  181 GPEDPIDPEY PIGPEDPIDP EYPIGLEDPI DPEDPIDPED PIDPEDPIGP EDPIDPEDPI 240
  241 GPEDPIDPEY PIGPEDPIGP EDPIGPEDPI GPEDPIGPED SIDPEDPIGP EDPIGPEDPI 300
  301 GPEDPIDPED PIGPEDLNFF TAFNSQIEQN VLHKVIMRIN EMAHRSTLLN GRTKTYTLLF 360
  361 SQESQEPDSG QPLNNHDVPP FRKPRSPLET FKKVGIPIIA VILSLIALGI VALLIKVVLD 420
  421 KYYFICGNPL TFIPRGQMCD GHLDCASGED EEHCVKNFPE KPGVTVRLSK DRSTLQVLDA 480
  481 ARGTWASVCF DNFTEALAKT ACRQMGYNSQ PAFGPVEMGP NQTLLVTPVT GNSQELQMQN 540
  541 GSRSCLSGSL VSLRCLDCGK SLKTTRVVGG VEASADSWPW QVSIQYNKQH VCGGSILDHH 600
  601 WILTAAHCFR KYLDVSSWKV RAGSNKLGNS PSLPVAKIFI AEPNPLQPKE KDIALVKLKM 660
  661 PLTFSGSVRP ICLPFSDEEL IPTMPVWVIG WGFTEENGGK MSDTLLQASV QVIDSARCNA 720
  721 EDAYQGEVTA GMLCAGTPQG GKDTCQGDSG GPLMYHYDKW QVVGIVSWGY GCGSPSTPGV 780
  781 YTKVTAYLDW IYNVRRSEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle