YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109484554
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METIEVEEGQ TLNLTCVTSL TKNASLQWLA PSGFTIFLNQ HPALKSSKYQ LLHHSATQLS  60
   61 VSVSNVTLRE EGVYTCLHYG SSVKTKQVRV TVLVTPFQPT VEALVLRRQN GEKSVVLKCS 120
  121 TERSKPPPQV TWLLGGGLEI DGKSRERGFF LRSGSVCNQT HKAFLMCDTV LAHTETDKDL 180
  181 LRCLSGGPYI QSQCLEAEFC FSPFLVADQE TTSEAPEQSS LSSQALQQPT STVSMMENSS 240
  241 MPETDKEEKE HATQDPVMIT EASAQHSGLA RRNSGILLLT LVSFLIFILF IIIQLFIMKL 300
  301 RKAHVIWKKE SEISEQALES YRSRSNNEET SSQENNSQAS QSKHCMNYIM RLYSGAKTKK 360
  361 SARHWKMEGK HSRVPESIV

Type	Start	End	Confidence
Non-Cytoplasmic	1	274	0.92
Transmembrane Helix	275	298	0.92
Cytoplasmic	299	379	0.92