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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149020438, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLLLPL CWAVEVKRPR GVSLSNHHFY DESKPFTCLD GTATIPFDQV NDDYCDCKDG  60
   61 SDEPGTAACP NGSFHCTNTG YKPLYILSSR VNDGVCDCCD GTDEYNSGTV CENTCREKGR 120
  121 KEKESLQQLA EVTREGFRLK KILIEEWKTA REEKQSKLLE LQAGKKSLED QVETLRTAKE 180
  181 EAERPEKEAK DQHRKLWEEQ QAAAKARREQ ELAASAFQEL DDNMDGLVSL AELQTHPELD 240
  241 TDGDGGLSEE EAQALLSGDT QTDTTSFYDR VWAAIRDKYR SEVPPTDIPV PEVTEPKEEK 300
  301 LPVLPPMEEE EEEEEPEEEE EEEEEEVPGE QPKEVPPPQQ PLRPPSPAED EKMPPYDEET 360
  361 QAIIDAAQEA RNKFEEVERS LKEMEESIRS LEQEISFDFG PSGEFAYLYS QCYELTTNEY 420
  421 VYRLCPFKLV SQKPKHGGSP TSLGTWGSWA GPDDDKFSAM KYEQGTGCWQ GPNRSTTVRL 480
  481 LCGKETVVTS TTEPSRCEYL MELMTPAACP EPPPEVPTDG DHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle