YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109479485, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAKGNPGDP RTPHAPATGM ILFGWRRFRI LAPEVLGSEL RVSHAWSARA QRSLGSPMPS  60
   61 VRLSVGLLAA LAAGGAVALL CYCVYLDRRR HRDPAFRRCL RDQRRAGQSN AKAPARQLWD 120
  121 PEKKKTLQEF FLQEMQMGKL CLARGEHGMG FEHFTNALLV CGQPKELLMF FKNTLPPEVF 180
  181 QMLLYKIPII CQQLEADMHE QEVLDG

Type	Start	End	Confidence
Non-Cytoplasmic	1	62	0.64
Transmembrane Helix	63	86	0.90
Cytoplasmic	87	206	0.85