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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109478111
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLQVFAFG VLALWGTRVC AQEPEFSYGC AEGSCYPATG DLLIGRAQKL SVTSTCGLHK  60
   61 PEPYCIVSHL QEDKKCFICD SRDPYHETLN PDSHLIENVV TTFAPNRLKI WWQSENGVEN 120
  121 VTVQLDLEAE FHFTHLIMTF KTFRPAAMLI ERSSDFGKTW GVYRYFAYDC ESSFPGISTG 180
  181 PMKKVDDIIC DSRYSDIEPS TEGEVIFRAL DPAFKIEDPY SPRIQNLLKI TNLRIKFVKL 240
  241 HTLGDNLLDS RMEIREKYYY AVYDMVVRGN CFCYGHASEC APVDGFNEEV EGMVHGHCMC 300
  301 RHNTKGLNCE LCMDFYHDLP WRPAEGRNSN ACKKCNCNEH SSSCHFDMAV FLATGNVSGG 360
  361 VCDNCQHNTM GRNCEQCKPF YFQHPERDIR DPNLCEPCTC DPAGSENGGI CDGYTDFSVG 420
  421 LIAGQCRCKL HVEGERCDVC KEGFYDLSAE DPFGCKSCAC NPLGTIPGGN PCDSETGYCY 480
  481 CKRLVTGQRC DQCLPQHWGL SNDLDGCRPC DCDLGGALNN SCSEDSGQCS CLPHMIGRQC 540
  541 NEVESGYYFT TLDHYIYEAE EANLGPGVVV VERRYIQDRI PSWTGPGFVR VPEGAYLEFF 600
  601 IDNIPHSMEY EILIRYEPQL PDHWEKAVIT VQRPGRIPTS SRCGNTVPDD DNQVVSLSPG 660
  661 SRYVVLPRPV CFEKGMNYTV RLELPQYTAS GSDVESPYTL IDSLVLMPYC KSLDIFTVGG 720
  721 SGDGEVTNSA WETFQRYRCL ENSRSVVKTP MTDVCRNIIF SISALIHQAG LACECDPQGS 780
  781 LSSVCDPNGG QCQCRPNVVG RTCNRCAPGT FGFGPNGCKP CDCHLQGSVS AFCDAVTGQC 840
  841 HCFQGIYARQ CDRCLPGFWG FPSCQPCQCN GHAEDCDTVT GECLSCQDYT TGHNCERCLA 900
  901 GYYGDPIIGS GDHCRPCPCP DGPDSGRQFA RSCYQDPVTL QLACVCDPGY IGSRCDGCAS 960
  961 GYFGNPSDFG GSCQPCQCHH NIDTTDPEAC DKETGRCLKC LYHTEGDHCQ FCQHGYYGDA1020
 1021 LRQDCRKCVC NYLGTVREHC NGSDCHCDKT TGQCSCLPNV IGQNCDRCAP HTWQLASGTG1080
 1081 CEPCNCNAVH SFGPSCNEFT GQCQCMPGFG GRTCSECQEL FWGDPDVECR ACDCDPRGIE1140
 1141 TPQCDQSTGQ CVCVEGVEGP RCDKCTRGYS GVFPDCTPCH QCFALWDVII GELTNRTHKF1200
 1201 LEKAKALKIS GVIGPYRETV DSVEKKVNEI RDILAQSPAA EPLKNIGILF EEAEKLTKDV1260
 1261 TEKMAQVEVK LSDTASRSNS TAGELDALQA EAGSLDKTVN ELAEQLEFIK NSDIQGALDS1320
 1321 ITKYFQISLE AEKRVNASTT DPNSTVEQSA LTRDRVEDLM LERESQFKEK QEEQARLLDE1380
 1381 LAGKLQSLDL SAAAEMTCGT HPGADCSESE CGGPNCRTDE GEKKCGGPGC GGLVTVAHSA1440
 1441 WQKAMDFDRD VLNALAEVEQ LSKMVSEAKV RADEAKQNAQ DVLLKTNATR EKVDRSNEDL1500
 1501 RNLIKQIRDF LTEDSADLDS IEAVANEVLK MEMPSTPQQL QNLTEDIRER VETLSQVEVI1560
 1561 LQQSAADIAR AELLLEEAKR XSKSATDVKV TADMVKEALE EAEKAQVAAE KAIKQADEDI1620
 1621 QGTQNLLTSI ESETAASEET LTNASQRISK LERNVEELKR KAAQNSGEAD YIEKVVYSVK1680
 1681 QSADEVKKTL DGELDEKYKK VESLIAQKTE ESADARRKAE LLQNEAKTLL AQANSKLQLL1740
 1741 EDLERKYEDN QKYLEDKAQE LVRLEGEVRS LLKDISEKVA VYSTCL

YRC Informatics Platform - Version 3.0
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