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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109483412
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLTVRVSW TLPGPAHPLH PSLPDFLNRI TTATSGSGYG GGGGSDGSSE LSEAGNSLPR  60
   61 ELERRIPVES LSGLEKHESL VDLEVPEDPI DPEYPIGPKD PIDPEYPIGP EDSIDPEYPI 120
  121 GPEDPIDPEY PIGPEDPIDP EDPIGPEDPI GPEDPIGPED PIGPEDSIDP EDPIDPEYPI 180
  181 GPEDSIDPED PIDPEYPIGP EDPIDPEDPI GPEDPIGPED SIDPEDPIGP EDSIDPEDPI 240
  241 DPEDPIGPED PIDPEDPIGP EYPIGPEDSI DPEDPIGPEY PIGPEDSIDP EDPIDPEYPI 300
  301 GPEDPIGPED SIDPEDPIDP EYPIGPEDSI DPEDPIDPEY PIGPEDPIDP EYPIGPEDPI 360
  361 GPEDSIDPED PIDPEYPIGP EDPIDPEDPI GPEDSIDPED PIDPEYPIGP EDPIDPEDPI 420
  421 GPEYPIGPED SIDPEDPIGP EDLNFFTAFN SQMEQNVLHE VIMRINEMAH RSTLLNGRTK 480
  481 TYTLLFSQES QEPDSGQPLN NHDVPPFRKP RSPLETFKKV GIPIIAVILS LIALGIVALL 540
  541 IKVVLDKYYF ICGNPLTFIP RGQMCDGHLD CASGEDEEHC VKNFPEKPGV TVRLSKDRST 600
  601 LQVLDAARGT WASVCFDNFT EALAKTACRQ MGYNSQPAFG PVEMGPNQTL LVTPVTGNSQ 660
  661 ELQMQNGSRS CLSGSLVSLR CLDCGKSLKT TRVVGGVEAS ADSWPWQVSI QYNKQHVCGG 720
  721 SILDHHWILT AAHCFRKYLD VSSWKVRAGS NKLGNSPSLP VAKIFIAEPN PLQPKEKDIA 780
  781 LVKLKMPLTF SGSVRPICLP FSDEELIPTM PVWVIGWGFT EENGGKMSDT LLQASVQVID 840
  841 SARCNAEDAY QGEVTAGMLC AGTPQGGKDT CQGDSGGPLM YHYDKWQVVG IVSWGYGCGS 900
  901 PSTPGVYTKV TAYLDWIYNV RRVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle