YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109483354
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METIEVEEGQ TLNLTCVTSL TKNASLQWLA PSGFTIFLNQ HPALKSSKYQ LLHHSATQLS  60
   61 VSVSNVTLRE EGVYTCLHYG SSVKTKQVRV TVLVTPFQPT VEALVLRRQN GEKSVVLKCS 120
  121 TERSKPPPQV TWLLGGGLEI DGELHHEFEA DGKISNTTST LVVRSYGKNS TVHCVIRHKG 180
  181 LQGRKLVAPF RFGDLVADQE TTSEAPEQSS LSSQALQQPT STVSMMENSS MPETDKEEKE 240
  241 HATQDPVMIT EASAQHSGLA RRNSGILLLT LVSFLIFILF IIIQLFIMKL RKAHVIWKKE 300
  301 SEISEQALES YRSRSNNEET SSQENNSQAS QSKHCMNYIM RLYSGAKTKK SARHWKMEGK 360
  361 HSRVPESIV

Type	Start	End	Confidence
Non-Cytoplasmic	1	264	0.91
Transmembrane Helix	265	288	0.92
Cytoplasmic	289	369	0.91