YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109482422
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLCAERAQ GLNCYNCTMI PFGNTCSSTA TCSYPDGVCA IQVAEVVMGS VRLKVKDHIC  60
   61 LPVCPTSSQT AEILGTVVDM KISCCNTDLC NAAGPTGGST WTMARVLLFS LGSVLLQILL 120
  121 EGSSKAPPPL SFYPYV

Type	Start	End	Confidence
Cytoplasmic	1	100	0.67
Transmembrane Helix	101	120	0.66
Non-Cytoplasmic	121	136	0.86