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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109480982, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRCFQLPCS TRMPTAEVPQ AAGGQGDGGD GEEAAEPEGV FKAPRNAKRK DRDYVRFTPL  60
   61 LLVLAALASA GVMLWYFLGY KAEVTISQVY SGSLRVLNRH FSQDLARRES IAFRTETAKA 120
  121 QKMFQELVAS TRLGTYYNSS SIYAFGEGPL ICFFWFILDI PEYQRLTLSP EVVRELLVGE 180
  181 LLSNSSALAS YRTEYEVDPE GLVILEASVN DIVVLNSTLG CYRYSYVNPG QVLRLRGPDQ 240
  241 QTTSCLWHLQ GPEDLMLKVQ LEWTRVDCRD RVAMYDAAGP LEKRLITSVY GCSRQEPVME 300
  301 VLASGSVMAV VWKKGLHSFY DPFLLSVKSV AFQDCQVNLT LEGRLDPQGF LRTPYYPSYY 360
  361 SPSTHCSWHL TVPSLDYGLA LWFDAYALRR QKYNLLCTQG QWMIQNRRLC GFRTLQPYAE 420
  421 RIPVVASDGI TINFTSQISL TGPGVQVYYS LYNQSDPCPG EFLCSVNGLC VPACDGIKDC 480
  481 PNGLDERNCV CRAMFQCQED STCISLPRVC DRQPDCLNGS DEEQCQEGVP CGTFTFQCED 540
  541 RSCVKKPNPE CDGQADCRDG SDEEHCDCGL QGPSSRIVGG AMSSEGEWPW QASLQIRGRH 600
  601 ICGGALIADR WVITAAHCFQ EDSMASPRLW TVFLGKMRQN SRWPGEVSFK VSRLFLHPYH 660
  661 EEDSHDYDVA LLQLDHPVVY SATVRPVCLP ARSHFFEPGQ HCWITGWGAQ REGGPGSSTL 720
  721 QKVDVQLIPQ DLCNEAYRYQ VTPRMLCAGY RKGKKDACQG DSGGPLVCKE PSGRWFLAGL 780
  781 VSWGLGCGRP NFFGVYTRVT RVVNWIQQVL T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle