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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109482418
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAEVPQAA GGQGDGGDGE EAAEPEGVFK APRNAKRKDR DYVRFTPLLL VLAALASAGV  60
   61 MLWYFLGYKA EVTISQVYSG SLRVLNRHFS QDLARRESIA FRTETAKAQK MFQELVASTR 120
  121 LGTYYNSSSI YAFGEGPLIC FFWFILDIPE YQRLTLSPEV VRELLVGELL SNSSALASYR 180
  181 TEYEVDPEGL VILEASVNDI VVLNSTLGCY RYSYVNPGQV LRLRGPDQQT TSCLWHLQGP 240
  241 EDLMLKVQLE WTRVDCRDRV AMYDAAGPLE KRLITSVYGC SRQEPVMEVL ASGSVMAVVW 300
  301 KKGLHSFYDP FLLSVKSVAF QDCQVNLTLE GRLDPQGFLR TPYYPSYYSP STHCSWHLTV 360
  361 PSLDYGLALW FDAYALRRQK YNLLCTQGQW MIQNRRLCGF RTLQPYAERI PVVASDGITI 420
  421 NFTSQISLTG PGVQVYYSLY NQSDPCPGEF LCSVNGLCVP ACDGIKDCPN GLDERNCVCR 480
  481 AMFQCQEDST CISLPRVCDR QPDCLNGSDE EQCQEGVPCG TFTFQCEDRS CVKKPNPECD 540
  541 GQADCRDGSD EEHCDCGLQG PSSRIVGGAM SSEGEWPWQA SLQIRGRHIC GGALIADRWV 600
  601 ITAAHCFQED SMASPRLWTV FLGKMRQNSR WPGEVSFKVS RLFLHPYHEE DSHDYDVALL 660
  661 QLDHPVVYSA TVRPVCLPAR SHFFEPGQHC WITGWGAQRE GGPGSSTLQK VDVQLIPQDL 720
  721 CNEAYRYQVT PRMLCAGYRK GKKDACQGDS GGPLVCKEPS GRWFLAGLVS WGLGCGRPNF 780
  781 FGVYTRVTRV VNWIQQVLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle