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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109481981, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTYSSKVA NATFFGFHRL LLKWRGSIYK LLYREFIVFA VLYTAISLVY RLLLTGAQKR  60
   61 YFEKLSIYCD RYAEQIPVTF VLGFYVTLVV NRWWNQFVNL PWPDRLMFLI SSSVHGSDQH 120
  121 GRLLRRTLMR YVNLTSLLIF RSVSTAVYKR FPTMDHVVEA GFMTADERKL FDHLKSPHLK 180
  181 YWVPFIWFGN LATKARNEGR IRDSVDLQSL MTEMNRYRSW CSLLFGYDWV GIPLVYTQVV 240
  241 TLAVYTFFFA CLIGRQFLDP TKGYAGHDLD LYIPIFTLLQ FFFYAGWLKV AEQLINPFGE 300
  301 DDDDFETNWC IDRNLQVSLL AVDEMHMSLP KMKKDIYWDD SAARPPYTLA AADYCIPSFL 360
  361 GSTIQMGLSG SDFPAEDWLW NYEKQGHRHS VMRRVKRFLS THEHPGSPKR RRSFGRQASD 420
  421 SSMFFPPSPA RDLLNVPSRN PHRGSPTRKQ SHSQEGSPKL HSSMGELSTI RETSRTSTLQ 480
  481 SLSQQSSVRA SPTKMPQVPE VLITAAEAPE AAFASDNHQR DSTTSILSLE FTGVQASGTE 540
  541 QQEDPSGKVT PPGDPEPQTI SAGTEKDLFK FEEDLDDDIF PKRWSLPVFR ESRHTSLGNL 600
  601 GPDPVSPENA LLLDTETSSE TNGVHPGAGS AVSPDILYLM ESLDKETDIL EFNNEHTEEP 660
  661 LKGTPPRPRT WF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle