YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109480593
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIKRVHELV WKNDHTYWDE KSGACSPPSY QLFTLVPSVM SVLRKSMSFS LMGTLAASCL  60
   61 LLVALWAQKA DALPINSQCK LEAANFQQPY IVNRTFMLAK EASLADNNTD VRLIGEELFR 120
  121 GVKAKDQCYL MKQVLNFTLE DVLLPQSDRF QPYMQEVVPF LTKLSSHLSP CHISGDDQNI 180
  181 QKNVRQLKET VQKLGESGEI KAIGELDLLF MSLRNACV

Type	Start	End	Confidence
Cytoplasmic	1	46	0.87
Transmembrane Helix	47	67	0.90
Non-Cytoplasmic	68	218	0.92