YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109479100
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLPTKQAMG RSGVLFSSSV LAHLERLEAQ MNRSNRKSEE PTVREKESSL RTKIRELQQQ  60
   61 RDRLRVEVKQ WRARVKESSA KEDSSKTTLS EQEVLEKQWR NLKAILQAYR FTGLSGKLTN 120
  121 RRVCVYISTA FEGNLLDSYF VDLAIEKPLR IHHHSIPAFI PLEKIATAYL QTDVQRLLFS 180
  181 LSEYLNAYVG RKYQADQLES DFCAFLTGPL QRSALCNLLS FTYKVEHGTQ AFSFSARLLY 240
  241 EDLTAALPTG VTVTRPAGVE ASSPHWEEHR ASHEMLFRTK TLHQAFASFS KETEMLHLNL 300
  301 VS

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	302	0.99