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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109477593, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFQSTLSLS LDSPTHAICM VGMEITLDIS GCAPDKCESF TIRGSPRVLI HISSSVITGK  60
   61 EDAVVWRPMK QPTEALVRMV SPSPTVDEDK VLVSYYCPDK EVPTATAVLF LTGIEVSLEA 120
  121 DIYRDGQLDM PSDKQAKKRW MWGLNGWGAI LLVNCNPETP SQSDEQSGAQ ESPREIQNLS 180
  181 QMTLTVEGPT SILRDYQLLL HTSKEEAKKT RVYWAHRGAS AYELVVGPDK PFHILPTFDT 240
  241 RGKETFYIEA TEFPSPSFSG LISFSVSLIE QAHDQLIPET PLYKDTVMFR VAPYIFLPST 300
  301 QLPLEVYLCR ELQLQGFVDS VTKLSEKSNV QVASVYEDPN RQGRWLQDEM AFCYTQAPHK 360
  361 TLSFILDTPR VAKLEDFPMK YSLSPGVGYL IQETEDHRVA SLDSVGNLIV SPPVKAQGKD 420
  421 YPLGRILIGG SFYPSFEGRD MSKALRDFVY AQQVQAPVEL FSDWLMTGHV DQFLCFVPVD 480
  481 DKNSDRKGFR LLLASPSACY ELFEQKQKEG FGDVTLFEDV RAEQLISNGR EVKTISQILA 540
  541 DENLREQNAY VEKCISLNRT LLKKELGLVD NDFIRIPQLF CLEPLTNVPS NQQTSKLFAR 600
  601 PYFPDMLQMI VLGKNIGIPK PFGPQIKGTC CLEETVCGLL EPLGLKCTFI DDFDCYLANI 660
  661 GDACASVIVN RVPFAFKWWK MNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle