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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109463161, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWFPVKKVR KQMKLLLLLL LLTCAAWLTY VHRSLVRPGR ALRQRLGYGR DGEKLTGVTD  60
   61 SRGVRVASST QRAEDSSESH EEEQAPEGRG PNMLFPGGAR KPPPLNLTHQ TPPWREEFKG 120
  121 QVNLHVFEDW CGGAVGHLRR NLHFPLFPHT RTTVTKLAVS PKWKNYGLRI FGFIHPARDG 180
  181 DVQFSVASDD NSEFWLSLDE SPAAAQLIAF VGKTGSEWTA PGEFTKFSSQ VSKPRRLMAS 240
  241 RRYYFELLHK QDDKGSDHVE VGWRAFLPGL KFEIIGSAHI SLYTDESSLK MDHVAHVPQS 300
  301 PASHVGGYPA QEEPSADMLH PDPRDTFFLT PRMEPLSLEN VLEPCAYAPT YVLKDFPIAR 360
  361 YQGLQFVYLS FIYPNDHTRL THMETENKCF YRESPLYLER FGFYKYMKMD KEEGEEDEEE 420
  421 EVQRRAFLFL NPDDFLDDED EQELLDSLEP TDASLQQSHR TPTPAASPET TASPTPPTTS 480
  481 PLDEQTLRHS RALNWAPRPL PLFLGRAPPP RTSEKSSSKV YVTRVRPGQR ASPRALRDSP 540
  541 WPPFPGVFLR PKPLPRVQLR VPPHPPRTQG YRTSSPKVTE LRPPVRAQTN QGGQEGQLHG 600
  601 QGLMVPTVDL NSSVETQSVT SFLSLSQVSR PQLPGEGEEG EDGAPGDEAT SEDSEEEEEQ 660
  661 AAGRPLGRWR EDAIDWQRTF SVGAMDFELL RSDWNDLRCN VSGNLQLPET EAVDVVAQYM 720
  721 ERLNARHGGR FSLLRIVNVE KRRDSARGSR FLLELELQER GGSRQRLSEY VFLRLPGARV 780
  781 GDEDGDSPEP PPAASSHPDS RPELCRPLHL AWRQDVMVHF IVPVKNQARW VVQFLADMTA 840
  841 LHVQTGDSYF NIILVDFESE DMDVERALRA AQLPRYQYLR RTGNFERSAG LQTGVDAVED 900
  901 PSSIVFLCDL HIHFPPNILD SIRKHCVEGK LAFAPVVMRL GCGSSPWDPH GYWEVNGFGL 960
  961 FGIYKSDFDR VGGMNTEEFR DQWGGEDWEL LDRVLQAGLE VERLRLRHFY HHYHSKRGMW1020
 1021 ATRSRKGARA HRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle